ENCFF001RMG

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000413053.2 ENST00000413053.2_1984_2004_+ 1984–2004 8276.00 81.09 35.18 93.16 MIR194-2HG-201 lncRNA parietal lobe (Tissue)
ENST00000413053.2 ENST00000413053.2_1985_2007_+ 1985–2007 1477.00 14.47 6.28 58.63 MIR194-2HG-201 lncRNA parietal lobe (Tissue)
ENST00000415386.2 ENST00000415386.2_302_374_+ 302–374 3.00 0.19 0.01 100.0 LINC01783-201 lncRNA parietal lobe (Tissue)
ENST00000415804.2 ENST00000415804.2_467_487_+ 467–487 6.00 85.71 0.03 100.0 RPS7P15-201 processed pseudogene parietal lobe (Tissue)
ENST00000426867.1 ENST00000426867.1_26_86_+ 26–86 277.00 1.98 1.18 100.0 SNORD62B-201 snoRNA parietal lobe (Tissue)
ENST00000426867.1 ENST00000426867.1_72_86_+ 72–86 644.00 4.61 2.74 100.0 SNORD62B-201 snoRNA parietal lobe (Tissue)
ENST00000426867.1 ENST00000426867.1_1_35_+ 1–35 8361.00 59.84 35.54 95.04 SNORD62B-201 snoRNA parietal lobe (Tissue)
ENST00000426867.1 ENST00000426867.1_1_86_+ 1–86 1319.00 9.44 5.61 100.0 SNORD62B-201 snoRNA parietal lobe (Tissue)
ENST00000426867.1 ENST00000426867.1_58_86_+ 58–86 12.00 0.09 0.05 100.0 SNORD62B-201 snoRNA parietal lobe (Tissue)
ENST00000432845.1 ENST00000432845.1_2382_2409_+ 2382–2409 30.00 85.71 0.13 100.0 MRPL32-203 nonsense mediated decay parietal lobe (Tissue)
ENST00000436739.2 ENST00000436739.2_403_416_+ 403–416 621.00 98.26 2.64 100.0 ENST00000436739 lncRNA parietal lobe (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1238_+ 1182–1238 101.00 1.18 0.43 56.74 TMEM107-204 protein coding parietal lobe (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1225_+ 1182–1225 93.00 1.09 0.40 100.0 TMEM107-204 protein coding parietal lobe (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1267_+ 1182–1267 866.00 10.13 3.68 100.0 TMEM107-204 protein coding parietal lobe (Tissue)
ENST00000437139.7 ENST00000437139.7_1209_1267_+ 1209–1267 856.00 10.01 3.64 34.57 TMEM107-204 protein coding parietal lobe (Tissue)
ENST00000437139.7 ENST00000437139.7_1225_1267_+ 1225–1267 285.00 3.33 1.21 100.0 TMEM107-204 protein coding parietal lobe (Tissue)
ENST00000448136.6 ENST00000448136.6_1026_1098_+ 1026–1098 816.00 33.08 3.47 100.0 SNHG16-201 lncRNA parietal lobe (Tissue)
ENST00000448136.6 ENST00000448136.6_1027_1095_+ 1027–1095 1339.00 54.28 5.69 86.28 SNHG16-201 lncRNA parietal lobe (Tissue)
ENST00000453082.5 ENST00000453082.5_267_347_+ 267–347 4931.00 20.09 20.96 100.0 SNHG14-207 lncRNA parietal lobe (Tissue)
ENST00000458770.1 ENST00000458770.1_7_74_+ 7–74 85526.00 92.04 363.52 97.07 SNORD105B-201 snoRNA parietal lobe (Tissue)
ENST00000458838.1 ENST00000458838.1_8_75_+ 8–75 6167.00 61.55 26.21 81.71 SNORD121B-201 snoRNA parietal lobe (Tissue)
ENST00000458892.1 ENST00000458892.1_5_39_+ 5–39 16.00 0.02 0.07 100.0 SNORD127-201 snoRNA parietal lobe (Tissue)
ENST00000458892.1 ENST00000458892.1_5_80_+ 5–80 85335.00 94.50 362.71 99.26 SNORD127-201 snoRNA parietal lobe (Tissue)
ENST00000458893.1 ENST00000458893.1_3_64_+ 3–64 16386.00 89.38 69.65 100.0 SNORD42B-201 snoRNA parietal lobe (Tissue)
ENST00000459254.1 ENST00000459254.1_69_90_+ 69–90 63.00 0.64 0.27 100.0 RNY4P25-201 misc RNA parietal lobe (Tissue)