ENCFF001RMG

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000401182.3 ENST00000401182.3_11_31_+ 11–31 21.00 51.22 0.09 100.0 MIR450B-201 miRNA parietal lobe (Tissue)
ENST00000401258.3 ENST00000401258.3_48_71_+ 48–71 344.00 57.33 1.46 100.0 MIR887-201 miRNA parietal lobe (Tissue)
ENST00000401280.3 ENST00000401280.3_49_69_+ 49–69 969.00 89.47 4.12 100.0 MIR889-201 miRNA parietal lobe (Tissue)
ENST00000408139.1 ENST00000408139.1_5_91_+ 5–91 2744.00 82.11 11.66 100.0 SNORD111-201 snoRNA parietal lobe (Tissue)
ENST00000408314.1 ENST00000408314.1_5_86_+ 5–86 1800.00 66.10 7.65 83.92 SNORD88A-201 snoRNA parietal lobe (Tissue)
ENST00000408406.1 ENST00000408406.1_32_53_+ 32–53 260.00 95.59 1.11 100.0 MIR548K-201 miRNA parietal lobe (Tissue)
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 87.00 47.80 0.37 100.0 MIR320B2-201 miRNA parietal lobe (Tissue)
ENST00000408537.1 ENST00000408537.1_15_35_+ 15–35 574.00 92.43 2.44 100.0 MIR1271-201 miRNA parietal lobe (Tissue)
ENST00000408573.1 ENST00000408573.1_4_71_+ 4–71 128642.00 97.35 546.78 100.0 SNORD100-201 snoRNA parietal lobe (Tissue)
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 344.00 0.26 1.46 100.0 SNORD100-201 snoRNA parietal lobe (Tissue)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 120.00 0.09 0.51 100.0 SNORD100-201 snoRNA parietal lobe (Tissue)
ENST00000408573.1 ENST00000408573.1_26_71_+ 26–71 59.00 0.04 0.25 100.0 SNORD100-201 snoRNA parietal lobe (Tissue)
ENST00000408587.1 ENST00000408587.1_43_74_+ 43–74 796.00 23.22 3.38 100.0 SNORD111B-201 snoRNA parietal lobe (Tissue)
ENST00000410361.1 ENST00000410361.1_155_188_+ 155–188 1530.00 50.66 6.50 100.0 RNU2-36P-201 snRNA parietal lobe (Tissue)
ENST00000410361.1 ENST00000410361.1_79_116_+ 79–116 43.00 1.42 0.18 100.0 RNU2-36P-201 snRNA parietal lobe (Tissue)
ENST00000410413.1 ENST00000410413.1_2_65_+ 2–65 55870.00 92.96 237.47 96.42 SNORD19C-201 snoRNA parietal lobe (Tissue)
ENST00000410413.1 ENST00000410413.1_33_65_+ 33–65 225.00 0.37 0.96 100.0 SNORD19C-201 snoRNA parietal lobe (Tissue)
ENST00000410433.1 ENST00000410433.1_7_54_+ 7–54 1678.00 1.09 7.13 100.0 SNORD12B-201 snoRNA parietal lobe (Tissue)
ENST00000410433.1 ENST00000410433.1_31_84_+ 31–84 22.00 0.01 0.09 100.0 SNORD12B-201 snoRNA parietal lobe (Tissue)
ENST00000410433.1 ENST00000410433.1_7_84_+ 7–84 147143.00 95.15 625.42 98.58 SNORD12B-201 snoRNA parietal lobe (Tissue)
ENST00000410669.1 ENST00000410669.1_1_32_+ 1–32 2625.00 30.22 11.16 100.0 Y_RNA.609-201 misc RNA parietal lobe (Tissue)
ENST00000410717.1 ENST00000410717.1_15_31_+ 15–31 290.00 24.19 1.23 100.0 Y_RNA.612-201 misc RNA parietal lobe (Tissue)
ENST00000411292.1 ENST00000411292.1_6_82_+ 6–82 3413.00 2.51 14.51 100.0 SNORD71-201 snoRNA parietal lobe (Tissue)
ENST00000411292.1 ENST00000411292.1_51_79_+ 51–79 446.00 0.33 1.90 100.0 SNORD71-201 snoRNA parietal lobe (Tissue)
ENST00000411292.1 ENST00000411292.1_7_79_+ 7–79 128643.00 94.78 546.79 98.59 SNORD71-201 snoRNA parietal lobe (Tissue)