ENCFF001RME

Library Details

Organism: Homo Sapiens
Biosample: occipital lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFX
Description: Part of ENCODE experiment ENCSR000AFX. The libraries contained in this experiment come from human fetal occipital lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000658801.2 ENST00000658801.2_139_214_+ 139–214 5.00 0.25 0.01 100.0 LIMD1-AS1-204 lncRNA occipital lobe (Tissue)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 401.00 20.40 0.85 75.23 LIMD1-AS1-204 lncRNA occipital lobe (Tissue)
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 501859.00 81.81 1062.36 95.65 MIR99AHG-262 lncRNA occipital lobe (Tissue)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 18100.00 2.95 38.32 100.0 MIR99AHG-262 lncRNA occipital lobe (Tissue)
ENST00000660376.1 ENST00000660376.1_1_78_+ 1–78 1201.00 4.13 2.54 100.0 SNHG14-266 lncRNA occipital lobe (Tissue)
ENST00000660956.1 ENST00000660956.1_2_92_+ 2–92 1095.00 75.31 2.32 100.0 SNHG14-270 lncRNA occipital lobe (Tissue)
ENST00000661541.1 ENST00000661541.1_446_534_+ 446–534 757.00 0.26 1.60 100.0 SNHG14-275 lncRNA occipital lobe (Tissue)
ENST00000661688.1 ENST00000661688.1_965_986_+ 965–986 2175.00 0.27 4.60 100.0 MIR9-2HG-225 lncRNA occipital lobe (Tissue)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 729182.00 89.40 1543.57 91.7 MIR9-2HG-225 lncRNA occipital lobe (Tissue)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 120.00 13.76 0.25 100.0 MEG8-233 lncRNA occipital lobe (Tissue)
ENST00000661815.1 ENST00000661815.1_2_70_+ 2–70 399.00 45.76 0.84 100.0 MEG8-233 lncRNA occipital lobe (Tissue)
ENST00000661889.1 ENST00000661889.1_1145_1233_+ 1145–1233 4559.00 3.27 9.65 100.0 SNHG14-278 lncRNA occipital lobe (Tissue)
ENST00000661889.1 ENST00000661889.1_2_92_+ 2–92 111220.00 79.70 235.44 92.15 SNHG14-278 lncRNA occipital lobe (Tissue)
ENST00000662228.1 ENST00000662228.1_1206_1269_+ 1206–1269 890.00 46.79 1.88 100.0 MEG8-234 lncRNA occipital lobe (Tissue)
ENST00000662228.1 ENST00000662228.1_1205_1272_+ 1205–1272 202.00 10.62 0.43 100.0 MEG8-234 lncRNA occipital lobe (Tissue)
ENST00000663187.1 ENST00000663187.1_2_76_+ 2–76 962.00 84.02 2.04 100.0 SNHG17-252 lncRNA occipital lobe (Tissue)
ENST00000663945.1 ENST00000663945.1_3_89_+ 3–89 9825.00 30.89 20.80 73.34 SNHG14-288 lncRNA occipital lobe (Tissue)
ENST00000663945.1 ENST00000663945.1_2_92_+ 2–92 18522.00 58.23 39.21 91.13 SNHG14-288 lncRNA occipital lobe (Tissue)
ENST00000665397.1 ENST00000665397.1_2_81_+ 2–81 1586.00 6.02 3.36 100.0 SNHG14-295 lncRNA occipital lobe (Tissue)
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 1887.00 84.62 3.99 100.0 MEG8-240 lncRNA occipital lobe (Tissue)
ENST00000666022.1 ENST00000666022.1_1_88_+ 1–88 12313.00 43.18 26.06 100.0 SNHG14-303 lncRNA occipital lobe (Tissue)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 3510.00 2.57 7.43 100.0 SNHG14-306 lncRNA occipital lobe (Tissue)
ENST00000666663.1 ENST00000666663.1_59_82_+ 59–82 1033.00 0.76 2.19 100.0 SNHG14-306 lncRNA occipital lobe (Tissue)
ENST00000666663.1 ENST00000666663.1_2_82_+ 2–82 105880.00 77.55 224.13 98.88 SNHG14-306 lncRNA occipital lobe (Tissue)
ENST00000666663.1 ENST00000666663.1_42_82_+ 42–82 1628.00 1.19 3.45 100.0 SNHG14-306 lncRNA occipital lobe (Tissue)