ENCFF001RMD

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGH
Description: Part of ENCODE experiment ENCSR000AGH. The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000612233.1 ENST00000612233.1_1528_1555_+ 1528–1555 480.00 0.24 0.79 100.0 NOP56-219 retained intron uterus (Tissue)
ENST00000612233.1 ENST00000612233.1_1212_1282_+ 1212–1282 80433.00 40.01 133.06 79.52 NOP56-219 retained intron uterus (Tissue)
ENST00000612463.1 ENST00000612463.1_1_83_+ 1–83 1876.00 10.76 3.10 41.11 RNA5-8SN2-201 rRNA uterus (Tissue)
ENST00000612463.1 ENST00000612463.1_81_123_+ 81–123 94.40 0.54 0.16 51.58 RNA5-8SN2-201 rRNA uterus (Tissue)
ENST00000612463.1 ENST00000612463.1_1_50_+ 1–50 32.00 0.18 0.05 100.0 RNA5-8SN2-201 rRNA uterus (Tissue)
ENST00000612463.1 ENST00000612463.1_1_25_+ 1–25 578.00 3.32 0.96 100.0 RNA5-8SN2-201 rRNA uterus (Tissue)
ENST00000612463.1 ENST00000612463.1_10_37_+ 10–37 118.00 0.68 0.20 100.0 RNA5-8SN2-201 rRNA uterus (Tissue)
ENST00000612463.1 ENST00000612463.1_1_81_+ 1–81 4744.00 27.21 7.85 71.66 RNA5-8SN2-201 rRNA uterus (Tissue)
ENST00000612463.1 ENST00000612463.1_83_123_+ 83–123 103.93 0.60 0.17 56.79 RNA5-8SN2-201 rRNA uterus (Tissue)
ENST00000615835.1 ENST00000615835.1_56_79_+ 56–79 3.00 100.00 0.00 100.0 MIR7974-201 miRNA uterus (Tissue)
ENST00000616574.2 ENST00000616574.2_44_64_+ 44–64 183.00 47.04 0.30 100.0 MIR376A1-201 miRNA uterus (Tissue)
ENST00000616574.2 ENST00000616574.2_7_27_+ 7–27 55.00 14.14 0.09 100.0 MIR376A1-201 miRNA uterus (Tissue)
ENST00000617785.1 ENST00000617785.1_155_187_+ 155–187 4182.00 1.66 6.92 100.0 U2.3-201 snRNA uterus (Tissue)
ENST00000617785.1 ENST00000617785.1_93_187_+ 93–187 4343.69 1.72 7.19 46.6 U2.3-201 snRNA uterus (Tissue)
ENST00000617785.1 ENST00000617785.1_1_95_+ 1–95 153117.00 60.62 253.30 99.28 U2.3-201 snRNA uterus (Tissue)
ENST00000617785.1 ENST00000617785.1_99_187_+ 99–187 31.00 0.01 0.05 100.0 U2.3-201 snRNA uterus (Tissue)
ENST00000617785.1 ENST00000617785.1_1_87_+ 1–87 12989.00 5.14 21.49 68.78 U2.3-201 snRNA uterus (Tissue)
ENST00000617785.1 ENST00000617785.1_1_64_+ 1–64 2996.00 1.19 4.96 48.08 U2.3-201 snRNA uterus (Tissue)
ENST00000617785.1 ENST00000617785.1_1_70_+ 1–70 2742.00 1.09 4.54 89.11 U2.3-201 snRNA uterus (Tissue)
ENST00000617785.1 ENST00000617785.1_95_188_+ 95–188 4300.64 1.70 7.11 46.13 U2.3-201 snRNA uterus (Tissue)
ENST00000617785.1 ENST00000617785.1_170_188_+ 170–188 589.00 0.23 0.97 100.0 U2.3-201 snRNA uterus (Tissue)
ENST00000617785.1 ENST00000617785.1_93_116_+ 93–116 223.00 0.09 0.37 100.0 U2.3-201 snRNA uterus (Tissue)
ENST00000617785.1 ENST00000617785.1_1_75_+ 1–75 167.00 0.07 0.28 100.0 U2.3-201 snRNA uterus (Tissue)
ENST00000617785.1 ENST00000617785.1_22_116_+ 22–116 474.00 0.19 0.78 100.0 U2.3-201 snRNA uterus (Tissue)
ENST00000617785.1 ENST00000617785.1_1_90_+ 1–90 7418.94 2.94 12.27 55.31 U2.3-201 snRNA uterus (Tissue)