ENCFF001RMD

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGH
Description: Part of ENCODE experiment ENCSR000AGH. The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000251287.3 ENST00000251287.3_396_409_+ 396–409 5.00 7.04 0.01 100.0 HCN2-201 protein coding uterus (Tissue)
ENST00000261038.6 ENST00000261038.6_3100_3122_+ 3100–3122 706.00 79.42 1.17 100.0 SLC49A4-201 protein coding uterus (Tissue)
ENST00000284727.9 ENST00000284727.9_2255_2286_+ 2255–2286 585.00 27.49 0.97 100.0 ATP5MC3-201 protein coding uterus (Tissue)
ENST00000302506.8 ENST00000302506.8_1928_1942_+ 1928–1942 111.00 78.17 0.18 100.0 CDC25A-201 protein coding uterus (Tissue)
ENST00000320776.5 ENST00000320776.5_289_301_+ 289–301 1418.00 74.36 2.35 100.0 BLOC1S4-201 protein coding uterus (Tissue)
ENST00000321990.5 ENST00000321990.5_6301_6324_+ 6301–6324 319.00 6.44 0.53 100.0 ATAD5-201 protein coding uterus (Tissue)
ENST00000325089.7 ENST00000325089.7_9_20_+ 9–20 309.00 21.22 0.51 100.0 SLITRK5-201 protein coding uterus (Tissue)
ENST00000325418.5 ENST00000325418.5_207_220_+ 207–220 62.00 45.93 0.10 100.0 HASPIN-201 protein coding uterus (Tissue)
ENST00000327423.11 ENST00000327423.11_9327_9339_+ 9327–9339 412.00 64.48 0.68 100.0 PRR14L-201 protein coding uterus (Tissue)
ENST00000336854.9 ENST00000336854.9_1124_1136_+ 1124–1136 12923.00 98.94 21.38 100.0 ATG101-201 protein coding uterus (Tissue)
ENST00000345127.9 ENST00000345127.9_4554_4567_+ 4554–4567 9103.00 92.40 15.06 100.0 PRICKLE1-201 protein coding uterus (Tissue)
ENST00000347538.2 ENST00000347538.2_59_81_+ 59–81 2982.00 96.16 4.93 99.43 MIR133A2-201 miRNA uterus (Tissue)
ENST00000358769.7 ENST00000358769.7_52_66_+ 52–66 18.00 13.33 0.03 100.0 PBLD-204 protein coding uterus (Tissue)
ENST00000360737.4 ENST00000360737.4_3384_3405_+ 3384–3405 618769.00 84.26 1023.64 98.29 MIRLET7BHG-201 lncRNA uterus (Tissue)
ENST00000360737.4 ENST00000360737.4_4323_4344_+ 4323–4344 76959.00 10.48 127.31 90.46 MIRLET7BHG-201 lncRNA uterus (Tissue)
ENST00000362103.4 ENST00000362103.4_40_58_+ 40–58 14.00 1.34 0.02 36.84 MIR375-201 miRNA uterus (Tissue)
ENST00000362103.4 ENST00000362103.4_40_61_+ 40–61 1013.00 96.75 1.68 98.64 MIR375-201 miRNA uterus (Tissue)
ENST00000362104.3 ENST00000362104.3_59_80_+ 59–80 10671.00 85.18 17.65 100.0 MIR30E-201 miRNA uterus (Tissue)
ENST00000362104.3 ENST00000362104.3_17_40_+ 17–40 824.00 6.58 1.36 100.0 MIR30E-201 miRNA uterus (Tissue)
ENST00000362111.4 ENST00000362111.4_42_63_+ 42–63 142.00 48.80 0.23 100.0 MIR29A-201 miRNA uterus (Tissue)
ENST00000362114.1 ENST00000362114.1_18_39_+ 18–39 336.00 73.52 0.56 100.0 MIR345-201 miRNA uterus (Tissue)
ENST00000362117.1 ENST00000362117.1_10_31_+ 10–31 146920.00 96.90 243.05 100.0 MIR16-2-201 miRNA uterus (Tissue)
ENST00000362125.3 ENST00000362125.3_58_80_+ 58–80 155.00 3.79 0.26 100.0 MIR340-201 miRNA uterus (Tissue)
ENST00000362125.3 ENST00000362125.3_16_37_+ 16–37 3663.00 89.56 6.06 100.0 MIR340-201 miRNA uterus (Tissue)
ENST00000362127.2 ENST00000362127.2_50_71_+ 50–71 6988.00 72.89 11.56 100.0 MIR107-201 miRNA uterus (Tissue)