ENCFF001RMD

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGH
Description: Part of ENCODE experiment ENCSR000AGH. The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 3892149.00 98.97 6438.82 99.87 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 3124.00 8.12 5.17 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 21251.00 55.22 35.16 78.67 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 5986.00 66.58 9.90 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 766.00 61.87 1.27 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 2779.00 23.43 4.60 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 184787.00 96.19 305.70 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 25451.00 96.48 42.10 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 474.00 16.44 0.78 95.95 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 29.00 1.01 0.05 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 880.00 0.02 1.46 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 359.00 36.37 0.59 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 145.00 7.65 0.24 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_69_+ 1–69 544.00 12.33 0.90 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_42_+ 1–42 747.00 16.93 1.24 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_18_+ 1–18 227.00 5.15 0.38 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHRX-3876801 tRNA-transcript-chrX-3876801_1_55_+ 1–55 42.00 16.09 0.07 100.0 TRNA-TRANSCRIPT-CHRX-3876801 Ile tRNA uterus (Tissue)