ENCFF001RMD

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGH
Description: Part of ENCODE experiment ENCSR000AGH. The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000595794.5 ENST00000595794.5_236_320_+ 236–320 423070.71 21.00 699.89 21.46 C19orf48P-203 retained intron uterus (Tissue)
ENST00000595794.5 ENST00000595794.5_236_330_+ 236–330 6219.00 0.31 10.29 83.54 C19orf48P-203 retained intron uterus (Tissue)
ENST00000595794.5 ENST00000595794.5_236_276_+ 236–276 219.00 0.01 0.36 100.0 C19orf48P-203 retained intron uterus (Tissue)
ENST00000595794.5 ENST00000595794.5_230_318_+ 230–318 27.00 0.00 0.04 100.0 C19orf48P-203 retained intron uterus (Tissue)
ENST00000597420.2 ENST00000597420.2_241_263_+ 241–263 142.00 63.96 0.23 100.0 ENST00000597420 lncRNA uterus (Tissue)
ENST00000600027.5 ENST00000600027.5_434_519_+ 434–519 355.00 5.36 0.59 100.0 RPS11-206 retained intron uterus (Tissue)
ENST00000600027.5 ENST00000600027.5_441_519_+ 441–519 5222.00 78.87 8.64 100.0 RPS11-206 retained intron uterus (Tissue)
ENST00000602315.3 ENST00000602315.3_752_771_+ 752–771 606401.00 60.90 1003.18 62.68 CARMN-209 lncRNA uterus (Tissue)
ENST00000602478.2 ENST00000602478.2_671_758_+ 671–758 3945.00 28.17 6.53 100.0 ENST00000602478 lncRNA uterus (Tissue)
ENST00000604535.1 ENST00000604535.1_1396_1410_+ 1396–1410 2.00 20.00 0.00 100.0 PPFIA1P1-201 processed pseudogene uterus (Tissue)
ENST00000606412.1 ENST00000606412.1_4_67_+ 4–67 612.00 6.45 1.01 100.0 SNORD114-21-201 snoRNA uterus (Tissue)
ENST00000606412.1 ENST00000606412.1_35_67_+ 35–67 6515.00 68.64 10.78 100.0 SNORD114-21-201 snoRNA uterus (Tissue)
ENST00000606510.1 ENST00000606510.1_2_82_+ 2–82 56.00 9.38 0.09 100.0 SNORD115-40-201 snoRNA uterus (Tissue)
ENST00000606724.1 ENST00000606724.1_22_43_+ 22–43 28542.00 97.97 47.22 100.0 MIR98-201 miRNA uterus (Tissue)
ENST00000607261.1 ENST00000607261.1_3_73_+ 3–73 10443.00 93.52 17.28 100.0 SNORD113-5-201 snoRNA uterus (Tissue)
ENST00000607334.3 ENST00000607334.3_14_34_+ 14–34 3151.00 93.09 5.21 100.0 MIR15A-201 miRNA uterus (Tissue)
ENST00000607441.3 ENST00000607441.3_43_63_+ 43–63 832.00 79.01 1.38 100.0 MIR376C-201 miRNA uterus (Tissue)
ENST00000607520.2 ENST00000607520.2_5465_5487_+ 5465–5487 822.00 46.05 1.36 100.0 SNHG21-206 retained intron uterus (Tissue)
ENST00000607707.1 ENST00000607707.1_5_84_+ 5–84 64.00 8.37 0.11 100.0 SNORD11B-201 snoRNA uterus (Tissue)
ENST00000608459.2 ENST00000608459.2_31_111_+ 31–111 8346.00 76.21 13.81 100.0 SNORD91B-201 snoRNA uterus (Tissue)
ENST00000608502.2 ENST00000608502.2_858_879_+ 858–879 2.00 9.52 0.00 100.0 MIR219A2HG-201 lncRNA uterus (Tissue)
ENST00000609620.2 ENST00000609620.2_7_86_+ 7–86 12494.00 57.62 20.67 70.54 SNORD91A-201 snoRNA uterus (Tissue)
ENST00000612171.2 ENST00000612171.2_4_25_+ 4–25 168813.00 47.50 279.27 97.16 MIR486-1-201 miRNA uterus (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1597_+ 1528–1597 59878.00 29.78 99.06 74.85 NOP56-219 retained intron uterus (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1583_+ 1528–1583 4316.00 2.15 7.14 100.0 NOP56-219 retained intron uterus (Tissue)