ENCFF001RMD

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGH
Description: Part of ENCODE experiment ENCSR000AGH. The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000570843.1 ENST00000570843.1_7_38_+ 7–38 7387.00 74.13 12.22 100.0 ENST00000570843 lncRNA uterus (Tissue)
ENST00000572453.1 ENST00000572453.1_1973_1994_+ 1973–1994 3319.00 85.61 5.49 100.0 MIR497HG-207 lncRNA uterus (Tissue)
ENST00000577164.2 ENST00000577164.2_444_465_+ 444–465 143778.00 99.17 237.85 99.52 MIR22HG-212 lncRNA uterus (Tissue)
ENST00000577887.1 ENST00000577887.1_1_51_+ 1–51 83.00 0.06 0.14 18.74 SNORD53B-201 snoRNA uterus (Tissue)
ENST00000577887.1 ENST00000577887.1_1_76_+ 1–76 138981.00 94.98 229.92 97.27 SNORD53B-201 snoRNA uterus (Tissue)
ENST00000577887.1 ENST00000577887.1_1_53_+ 1–53 360.00 0.25 0.60 81.26 SNORD53B-201 snoRNA uterus (Tissue)
ENST00000578036.5 ENST00000578036.5_3605_3616_+ 3605–3616 4264.00 96.04 7.05 100.0 ENST00000578036 lncRNA uterus (Tissue)
ENST00000578181.1 ENST00000578181.1_477_541_+ 477–541 2913.00 80.09 4.82 100.0 RPL23A-207 protein coding uterus (Tissue)
ENST00000578242.1 ENST00000578242.1_11_31_+ 11–31 765.00 79.77 1.27 100.0 MIR744-201 miRNA uterus (Tissue)
ENST00000578683.1 ENST00000578683.1_11_30_+ 11–30 124.00 67.39 0.21 100.0 MIR378C-201 miRNA uterus (Tissue)
ENST00000579003.2 ENST00000579003.2_1219_1238_+ 1219–1238 14158.00 78.33 23.42 83.22 MIR142HG-201 lncRNA uterus (Tissue)
ENST00000579003.2 ENST00000579003.2_1257_1279_+ 1257–1279 10.00 0.06 0.02 100.0 MIR142HG-201 lncRNA uterus (Tissue)
ENST00000579003.2 ENST00000579003.2_1221_1241_+ 1221–1241 96.00 0.53 0.16 2.04 MIR142HG-201 lncRNA uterus (Tissue)
ENST00000580533.1 ENST00000580533.1_1_91_+ 1–91 289.00 0.63 0.48 100.0 SNORD3C-201 snoRNA uterus (Tissue)
ENST00000580755.1 ENST00000580755.1_131_197_+ 131–197 599.42 0.24 0.99 70.52 RPL23A-208 retained intron uterus (Tissue)
ENST00000580755.1 ENST00000580755.1_131_199_+ 131–199 197.06 0.08 0.33 39.97 RPL23A-208 retained intron uterus (Tissue)
ENST00000580755.1 ENST00000580755.1_132_190_+ 132–190 186178.00 74.67 308.00 88.79 RPL23A-208 retained intron uterus (Tissue)
ENST00000580755.1 ENST00000580755.1_131_193_+ 131–193 56326.00 22.59 93.18 90.45 RPL23A-208 retained intron uterus (Tissue)
ENST00000581072.6 ENST00000581072.6_810_831_+ 810–831 293.00 8.44 0.48 100.0 MIR133A1HG-202 lncRNA uterus (Tissue)
ENST00000581305.1 ENST00000581305.1_509_570_+ 509–570 9218.00 6.83 15.25 38.29 RPL17-211 retained intron uterus (Tissue)
ENST00000581305.1 ENST00000581305.1_127_189_+ 127–189 12557.00 9.31 20.77 62.26 RPL17-211 retained intron uterus (Tissue)
ENST00000581305.1 ENST00000581305.1_127_196_+ 127–196 92.00 0.07 0.15 100.0 RPL17-211 retained intron uterus (Tissue)
ENST00000581305.1 ENST00000581305.1_127_192_+ 127–192 37850.00 28.05 62.62 93.51 RPL17-211 retained intron uterus (Tissue)
ENST00000581305.1 ENST00000581305.1_509_573_+ 509–573 66554.00 49.32 110.10 96.0 RPL17-211 retained intron uterus (Tissue)
ENST00000582320.4 ENST00000582320.4_575_597_+ 575–597 52476.00 55.78 86.81 71.55 ENST00000582320 lncRNA uterus (Tissue)