ENCFF001RMD

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGH
Description: Part of ENCODE experiment ENCSR000AGH. The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000554988.2 ENST00000554988.2_275_368_+ 275–368 1691.00 16.57 2.80 100.0 ENST00000554988 lncRNA uterus (Tissue)
ENST00000557108.6 ENST00000557108.6_4551_4587_+ 4551–4587 989.00 0.48 1.64 100.0 SNHG14-220 retained intron uterus (Tissue)
ENST00000557108.6 ENST00000557108.6_4526_4587_+ 4526–4587 96420.00 46.68 159.51 100.0 SNHG14-220 retained intron uterus (Tissue)
ENST00000557108.6 ENST00000557108.6_1419_1490_+ 1419–1490 98410.00 47.64 162.80 100.0 SNHG14-220 retained intron uterus (Tissue)
ENST00000557108.6 ENST00000557108.6_4525_4590_+ 4525–4590 1082.00 0.52 1.79 100.0 SNHG14-220 retained intron uterus (Tissue)
ENST00000559466.1 ENST00000559466.1_665_676_+ 665–676 936.00 99.05 1.55 100.0 TEKT4P2-201 transcribed unprocessed pseudogene uterus (Tissue)
ENST00000561554.5 ENST00000561554.5_316_344_+ 316–344 908.00 0.31 1.50 100.0 RPL4-202 retained intron uterus (Tissue)
ENST00000561554.5 ENST00000561554.5_276_321_+ 276–321 65.00 0.02 0.11 100.0 RPL4-202 retained intron uterus (Tissue)
ENST00000561554.5 ENST00000561554.5_276_344_+ 276–344 267680.00 90.95 442.83 98.57 RPL4-202 retained intron uterus (Tissue)
ENST00000561554.5 ENST00000561554.5_276_317_+ 276–317 489.00 0.17 0.81 100.0 RPL4-202 retained intron uterus (Tissue)
ENST00000561554.5 ENST00000561554.5_311_344_+ 311–344 3169.00 1.08 5.24 100.0 RPL4-202 retained intron uterus (Tissue)
ENST00000563103.1 ENST00000563103.1_221_256_+ 221–256 1.00 0.00 0.00 100.0 ENST00000563103 lncRNA uterus (Tissue)
ENST00000564647.5 ENST00000564647.5_345_386_+ 345–386 125.00 1.62 0.21 100.0 RPL4-207 retained intron uterus (Tissue)
ENST00000564647.5 ENST00000564647.5_318_386_+ 318–386 3292.00 42.65 5.45 100.0 RPL4-207 retained intron uterus (Tissue)
ENST00000565336.1 ENST00000565336.1_451_487_+ 451–487 17755.00 81.05 29.37 93.33 ENST00000565336 lncRNA uterus (Tissue)
ENST00000565336.1 ENST00000565336.1_446_487_+ 446–487 692.00 3.16 1.14 70.68 ENST00000565336 lncRNA uterus (Tissue)
ENST00000565907.1 ENST00000565907.1_307_381_+ 307–381 656092.00 75.72 1085.38 78.93 RBMX-210 retained intron uterus (Tissue)
ENST00000565907.1 ENST00000565907.1_307_354_+ 307–354 3029.00 0.35 5.01 100.0 RBMX-210 retained intron uterus (Tissue)
ENST00000565907.1 ENST00000565907.1_307_388_+ 307–388 1336.00 0.15 2.21 100.0 RBMX-210 retained intron uterus (Tissue)
ENST00000565907.1 ENST00000565907.1_307_350_+ 307–350 3052.00 0.35 5.05 100.0 RBMX-210 retained intron uterus (Tissue)
ENST00000567229.5 ENST00000567229.5_485_573_+ 485–573 10334.00 55.15 17.10 100.0 RPL4-214 retained intron uterus (Tissue)
ENST00000567229.5 ENST00000567229.5_1097_1162_+ 1097–1162 153.00 0.82 0.25 100.0 RPL4-214 retained intron uterus (Tissue)
ENST00000569473.1 ENST00000569473.1_47_96_+ 47–96 75.00 0.13 0.12 100.0 POLG-DT-202 lncRNA uterus (Tissue)
ENST00000569473.1 ENST00000569473.1_59_96_+ 59–96 10025.52 17.35 16.59 19.49 POLG-DT-202 lncRNA uterus (Tissue)
ENST00000569473.1 ENST00000569473.1_61_96_+ 61–96 36463.58 63.09 60.32 69.41 POLG-DT-202 lncRNA uterus (Tissue)