ENCFF001RMD

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGH
Description: Part of ENCODE experiment ENCSR000AGH. The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000496254.5 ENST00000496254.5_747_811_+ 747–811 11160.00 62.08 18.46 100.0 GNL3-211 retained intron uterus (Tissue)
ENST00000497519.1 ENST00000497519.1_681_769_+ 681–769 14206.00 74.31 23.50 100.0 RPL5-205 retained intron uterus (Tissue)
ENST00000497519.1 ENST00000497519.1_681_708_+ 681–708 839.00 4.39 1.39 100.0 RPL5-205 retained intron uterus (Tissue)
ENST00000499525.1 ENST00000499525.1_506_558_+ 506–558 24.00 2.68 0.04 100.0 ZBED9-AS1-201 lncRNA uterus (Tissue)
ENST00000507485.1 ENST00000507485.1_1149_1210_+ 1149–1210 28163.00 87.14 46.59 100.0 RPS3A-206 retained intron uterus (Tissue)
ENST00000509578.1 ENST00000509578.1_1330_1389_+ 1330–1389 5534.00 90.72 9.15 100.0 COX7C-203 protein coding uterus (Tissue)
ENST00000513027.3 ENST00000513027.3_272_305_+ 272–305 8824.00 1.93 14.60 91.31 RACK1-229 protein coding uterus (Tissue)
ENST00000513027.3 ENST00000513027.3_263_305_+ 263–305 2196.00 0.48 3.63 100.0 RACK1-229 protein coding uterus (Tissue)
ENST00000513027.3 ENST00000513027.3_241_306_+ 241–306 331904.03 72.42 549.07 79.35 RACK1-229 protein coding uterus (Tissue)
ENST00000513027.3 ENST00000513027.3_241_308_+ 241–308 91281.11 19.92 151.01 29.43 RACK1-229 protein coding uterus (Tissue)
ENST00000513060.5 ENST00000513060.5_713_786_+ 713–786 10533.00 14.26 17.42 65.0 RACK1-230 retained intron uterus (Tissue)
ENST00000513060.5 ENST00000513060.5_712_783_+ 712–783 61033.00 82.60 100.97 97.65 RACK1-230 retained intron uterus (Tissue)
ENST00000515961.1 ENST00000515961.1_38_58_+ 38–58 151.00 12.98 0.25 100.0 RNA5SP486-201 rRNA pseudogene uterus (Tissue)
ENST00000516201.1 ENST00000516201.1_1_30_+ 1–30 782.00 70.71 1.29 100.0 SCARNA5-201 scaRNA uterus (Tissue)
ENST00000516507.1 ENST00000516507.1_15_32_+ 15–32 583.00 0.28 0.96 100.0 RNY4-201 misc RNA uterus (Tissue)
ENST00000516507.1 ENST00000516507.1_1_26_+ 1–26 676.00 0.33 1.12 100.0 RNY4-201 misc RNA uterus (Tissue)
ENST00000516507.1 ENST00000516507.1_1_32_+ 1–32 116622.00 56.09 192.93 96.99 RNY4-201 misc RNA uterus (Tissue)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 13184.00 6.34 21.81 98.26 RNY4-201 misc RNA uterus (Tissue)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 410.00 0.20 0.68 100.0 RNY4-201 misc RNA uterus (Tissue)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 2977.00 1.43 4.92 43.73 RNY4-201 misc RNA uterus (Tissue)
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 12319.00 5.92 20.38 73.44 RNY4-201 misc RNA uterus (Tissue)
ENST00000516507.1 ENST00000516507.1_41_93_+ 41–93 2047.00 0.98 3.39 100.0 RNY4-201 misc RNA uterus (Tissue)
ENST00000516507.1 ENST00000516507.1_1_36_+ 1–36 10673.00 5.13 17.66 74.7 RNY4-201 misc RNA uterus (Tissue)
ENST00000516507.1 ENST00000516507.1_1_48_+ 1–48 649.00 0.31 1.07 100.0 RNY4-201 misc RNA uterus (Tissue)
ENST00000516507.1 ENST00000516507.1_54_93_+ 54–93 120.00 0.06 0.20 32.43 RNY4-201 misc RNA uterus (Tissue)