ENCFF001RMD

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGH
Description: Part of ENCODE experiment ENCSR000AGH. The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000516507.1 ENST00000516507.1_15_32_+ 15–32 583.00 0.28 0.96 100.0 RNY4-201 misc RNA uterus (Tissue)
ENST00000517927.2 ENST00000517927.2_384_405_+ 384–405 2891.00 81.12 4.78 86.32 MIR3142HG-201 lncRNA uterus (Tissue)
ENST00000521127.2 ENST00000521127.2_334_410_+ 334–410 3818.00 75.08 6.32 100.0 SNHG6-204 retained intron uterus (Tissue)
ENST00000521276.3 ENST00000521276.3_11_31_+ 11–31 36612.00 37.72 60.57 100.0 MIR151A-201 miRNA uterus (Tissue)
ENST00000521276.3 ENST00000521276.3_47_68_+ 47–68 50801.00 52.33 84.04 88.02 MIR151A-201 miRNA uterus (Tissue)
ENST00000523308.5 ENST00000523308.5_614_626_+ 614–626 2640.00 96.99 4.37 100.0 DENND3-221 protein coding uterus (Tissue)
ENST00000525239.5 ENST00000525239.5_93_116_+ 93–116 789.00 0.32 1.31 68.08 WDR74-204 protein coding uterus (Tissue)
ENST00000525239.5 ENST00000525239.5_50_116_+ 50–116 26.00 0.01 0.04 100.0 WDR74-204 protein coding uterus (Tissue)
ENST00000525239.5 ENST00000525239.5_90_116_+ 90–116 195.00 0.08 0.32 69.4 WDR74-204 protein coding uterus (Tissue)
ENST00000525239.5 ENST00000525239.5_93_187_+ 93–187 6104.00 2.48 10.10 76.23 WDR74-204 protein coding uterus (Tissue)
ENST00000525239.5 ENST00000525239.5_88_116_+ 88–116 86.00 0.03 0.14 30.6 WDR74-204 protein coding uterus (Tissue)
ENST00000525239.5 ENST00000525239.5_22_116_+ 22–116 1253.00 0.51 2.07 100.0 WDR74-204 protein coding uterus (Tissue)
ENST00000525239.5 ENST00000525239.5_155_187_+ 155–187 3378.00 1.37 5.59 100.0 WDR74-204 protein coding uterus (Tissue)
ENST00000525239.5 ENST00000525239.5_78_116_+ 78–116 930.00 0.38 1.54 100.0 WDR74-204 protein coding uterus (Tissue)
ENST00000527983.5 ENST00000527983.5_1320_1408_+ 1320–1408 35245.00 79.78 58.31 100.0 HSPA8-211 retained intron uterus (Tissue)
ENST00000530422.1 ENST00000530422.1_78_109_+ 78–109 855.00 12.61 1.41 100.0 SCARNA9-201 lncRNA uterus (Tissue)
ENST00000530769.5 ENST00000530769.5_2551_2618_+ 2551–2618 17363.00 66.94 28.72 100.0 TAF1D-215 retained intron uterus (Tissue)
ENST00000530769.5 ENST00000530769.5_2550_2623_+ 2550–2623 331.00 1.28 0.55 100.0 TAF1D-215 retained intron uterus (Tissue)
ENST00000532091.1 ENST00000532091.1_1164_1221_+ 1164–1221 1809.00 11.50 2.99 100.0 HSPA8-215 retained intron uterus (Tissue)
ENST00000532091.1 ENST00000532091.1_1133_1221_+ 1133–1221 8882.00 56.45 14.69 100.0 HSPA8-215 retained intron uterus (Tissue)
ENST00000532091.1 ENST00000532091.1_1128_1221_+ 1128–1221 41.00 0.26 0.07 100.0 HSPA8-215 retained intron uterus (Tissue)
ENST00000533872.5 ENST00000533872.5_427_507_+ 427–507 878.00 13.72 1.45 100.0 RPS2-215 retained intron uterus (Tissue)
ENST00000548801.1 ENST00000548801.1_2334_2355_+ 2334–2355 594667.00 87.06 983.76 88.23 ENST00000548801 lncRNA uterus (Tissue)
ENST00000554988.2 ENST00000554988.2_275_334_+ 275–334 2080.00 20.38 3.44 100.0 ENST00000554988 lncRNA uterus (Tissue)
ENST00000554988.2 ENST00000554988.2_275_320_+ 275–320 284.00 2.78 0.47 100.0 ENST00000554988 lncRNA uterus (Tissue)