ENCFF001RMD

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGH
Description: Part of ENCODE experiment ENCSR000AGH. The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000410413.1 ENST00000410413.1_33_65_+ 33–65 621.00 0.96 1.03 100.0 SNORD19C-201 snoRNA uterus (Tissue)
ENST00000410413.1 ENST00000410413.1_2_65_+ 2–65 61429.00 94.70 101.62 99.48 SNORD19C-201 snoRNA uterus (Tissue)
ENST00000410433.1 ENST00000410433.1_7_54_+ 7–54 1532.00 0.45 2.53 100.0 SNORD12B-201 snoRNA uterus (Tissue)
ENST00000410433.1 ENST00000410433.1_31_84_+ 31–84 398.00 0.12 0.66 100.0 SNORD12B-201 snoRNA uterus (Tissue)
ENST00000410433.1 ENST00000410433.1_7_84_+ 7–84 315817.00 93.44 522.46 98.78 SNORD12B-201 snoRNA uterus (Tissue)
ENST00000410669.1 ENST00000410669.1_1_32_+ 1–32 1526.00 38.05 2.52 100.0 Y_RNA.609-201 misc RNA uterus (Tissue)
ENST00000410717.1 ENST00000410717.1_15_31_+ 15–31 246.00 41.55 0.41 100.0 Y_RNA.612-201 misc RNA uterus (Tissue)
ENST00000411292.1 ENST00000411292.1_6_82_+ 6–82 1529.00 2.24 2.53 100.0 SNORD71-201 snoRNA uterus (Tissue)
ENST00000411292.1 ENST00000411292.1_51_79_+ 51–79 552.00 0.81 0.91 100.0 SNORD71-201 snoRNA uterus (Tissue)
ENST00000411292.1 ENST00000411292.1_7_79_+ 7–79 60933.00 89.19 100.80 98.4 SNORD71-201 snoRNA uterus (Tissue)
ENST00000413053.2 ENST00000413053.2_1985_2007_+ 1985–2007 856.00 11.56 1.42 58.03 MIR194-2HG-201 lncRNA uterus (Tissue)
ENST00000413053.2 ENST00000413053.2_1984_2004_+ 1984–2004 5813.00 78.53 9.62 94.12 MIR194-2HG-201 lncRNA uterus (Tissue)
ENST00000415386.2 ENST00000415386.2_302_374_+ 302–374 6.00 0.06 0.01 100.0 LINC01783-201 lncRNA uterus (Tissue)
ENST00000415804.2 ENST00000415804.2_467_487_+ 467–487 3.00 15.79 0.00 100.0 RPS7P15-201 processed pseudogene uterus (Tissue)
ENST00000426867.1 ENST00000426867.1_1_86_+ 1–86 1287.00 7.78 2.13 100.0 SNORD62B-201 snoRNA uterus (Tissue)
ENST00000426867.1 ENST00000426867.1_72_86_+ 72–86 4054.00 24.51 6.71 100.0 SNORD62B-201 snoRNA uterus (Tissue)
ENST00000426867.1 ENST00000426867.1_58_86_+ 58–86 339.00 2.05 0.56 100.0 SNORD62B-201 snoRNA uterus (Tissue)
ENST00000426867.1 ENST00000426867.1_26_86_+ 26–86 1228.00 7.42 2.03 100.0 SNORD62B-201 snoRNA uterus (Tissue)
ENST00000426867.1 ENST00000426867.1_1_35_+ 1–35 1001.00 6.05 1.66 72.22 SNORD62B-201 snoRNA uterus (Tissue)
ENST00000432845.1 ENST00000432845.1_2382_2409_+ 2382–2409 132.00 92.96 0.22 100.0 MRPL32-203 nonsense mediated decay uterus (Tissue)
ENST00000436739.2 ENST00000436739.2_403_416_+ 403–416 3785.00 98.47 6.26 100.0 ENST00000436739 lncRNA uterus (Tissue)
ENST00000437139.7 ENST00000437139.7_1209_1267_+ 1209–1267 3991.00 9.40 6.60 60.92 TMEM107-204 protein coding uterus (Tissue)
ENST00000437139.7 ENST00000437139.7_1225_1267_+ 1225–1267 4396.00 10.35 7.27 100.0 TMEM107-204 protein coding uterus (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1225_+ 1182–1225 95.00 0.22 0.16 100.0 TMEM107-204 protein coding uterus (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1238_+ 1182–1238 1569.00 3.69 2.60 60.07 TMEM107-204 protein coding uterus (Tissue)