ENCFF001RMD

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGH
Description: Part of ENCODE experiment ENCSR000AGH. The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000391145.1 ENST00000391145.1_18_97_+ 18–97 27135.00 88.05 44.89 100.0 SNORD90-201 snoRNA uterus (Tissue)
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 2561.00 0.67 4.24 100.0 SNORD69-201 snoRNA uterus (Tissue)
ENST00000391150.1 ENST00000391150.1_9_69_+ 9–69 356097.00 92.94 589.10 100.0 SNORD69-201 snoRNA uterus (Tissue)
ENST00000391150.1 ENST00000391150.1_35_69_+ 35–69 3696.00 0.96 6.11 100.0 SNORD69-201 snoRNA uterus (Tissue)
ENST00000391150.1 ENST00000391150.1_9_48_+ 9–48 3830.00 1.00 6.34 100.0 SNORD69-201 snoRNA uterus (Tissue)
ENST00000391232.1 ENST00000391232.1_9_80_+ 9–80 4592.00 59.05 7.60 74.03 SNORD70-201 snoRNA uterus (Tissue)
ENST00000393354.7 ENST00000393354.7_8003_8016_+ 8003–8016 2643.00 73.99 4.37 84.01 B4GALNT2-202 protein coding uterus (Tissue)
ENST00000393354.7 ENST00000393354.7_7988_8016_+ 7988–8016 65.00 1.82 0.11 100.0 B4GALNT2-202 protein coding uterus (Tissue)
ENST00000396355.5 ENST00000396355.5_35_56_+ 35–56 1421.00 89.09 2.35 100.0 NDE1-202 protein coding uterus (Tissue)
ENST00000401172.1 ENST00000401172.1_46_67_+ 46–67 1.00 33.33 0.00 100.0 MIR208B-201 miRNA uterus (Tissue)
ENST00000401182.3 ENST00000401182.3_11_31_+ 11–31 1622.00 62.92 2.68 100.0 MIR450B-201 miRNA uterus (Tissue)
ENST00000401258.3 ENST00000401258.3_48_71_+ 48–71 363.00 53.86 0.60 100.0 MIR887-201 miRNA uterus (Tissue)
ENST00000401280.3 ENST00000401280.3_49_69_+ 49–69 2263.00 88.81 3.74 100.0 MIR889-201 miRNA uterus (Tissue)
ENST00000408139.1 ENST00000408139.1_5_91_+ 5–91 5279.00 75.55 8.73 100.0 SNORD111-201 snoRNA uterus (Tissue)
ENST00000408314.1 ENST00000408314.1_5_86_+ 5–86 13475.00 71.78 22.29 88.22 SNORD88A-201 snoRNA uterus (Tissue)
ENST00000408406.1 ENST00000408406.1_32_53_+ 32–53 214.00 92.64 0.35 100.0 MIR548K-201 miRNA uterus (Tissue)
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 797.00 65.17 1.32 100.0 MIR320B2-201 miRNA uterus (Tissue)
ENST00000408537.1 ENST00000408537.1_15_35_+ 15–35 65.00 83.33 0.11 100.0 MIR1271-201 miRNA uterus (Tissue)
ENST00000408573.1 ENST00000408573.1_26_71_+ 26–71 264.00 0.19 0.44 100.0 SNORD100-201 snoRNA uterus (Tissue)
ENST00000408573.1 ENST00000408573.1_4_71_+ 4–71 125237.00 91.96 207.18 100.0 SNORD100-201 snoRNA uterus (Tissue)
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 1917.00 1.41 3.17 100.0 SNORD100-201 snoRNA uterus (Tissue)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 493.00 0.36 0.82 100.0 SNORD100-201 snoRNA uterus (Tissue)
ENST00000408587.1 ENST00000408587.1_43_74_+ 43–74 2136.00 57.62 3.53 100.0 SNORD111B-201 snoRNA uterus (Tissue)
ENST00000410361.1 ENST00000410361.1_155_188_+ 155–188 3826.00 24.59 6.33 100.0 RNU2-36P-201 snRNA uterus (Tissue)
ENST00000410361.1 ENST00000410361.1_79_116_+ 79–116 178.00 1.14 0.29 100.0 RNU2-36P-201 snRNA uterus (Tissue)