ENCFF001RMC

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000497519.1 ENST00000497519.1_675_769_+ 675–769 1.00 0.01 0.00 100.0 RPL5-205 retained intron temporal lobe (Tissue)
ENST00000499525.1 ENST00000499525.1_506_558_+ 506–558 138.00 3.84 0.28 100.0 ZBED9-AS1-201 lncRNA temporal lobe (Tissue)
ENST00000507485.1 ENST00000507485.1_1149_1210_+ 1149–1210 38908.00 86.95 79.63 100.0 RPS3A-206 retained intron temporal lobe (Tissue)
ENST00000509578.1 ENST00000509578.1_1330_1389_+ 1330–1389 32566.00 89.94 66.65 100.0 COX7C-203 protein coding temporal lobe (Tissue)
ENST00000513027.3 ENST00000513027.3_263_305_+ 263–305 1148.00 0.45 2.35 100.0 RACK1-229 protein coding temporal lobe (Tissue)
ENST00000513027.3 ENST00000513027.3_241_308_+ 241–308 45186.39 17.57 92.48 26.04 RACK1-229 protein coding temporal lobe (Tissue)
ENST00000513027.3 ENST00000513027.3_241_306_+ 241–306 188407.79 73.26 385.62 80.86 RACK1-229 protein coding temporal lobe (Tissue)
ENST00000513027.3 ENST00000513027.3_272_305_+ 272–305 4825.00 1.88 9.88 81.04 RACK1-229 protein coding temporal lobe (Tissue)
ENST00000513060.5 ENST00000513060.5_712_783_+ 712–783 100577.00 78.53 205.86 96.87 RACK1-230 retained intron temporal lobe (Tissue)
ENST00000513060.5 ENST00000513060.5_713_786_+ 713–786 23035.00 17.99 47.15 68.0 RACK1-230 retained intron temporal lobe (Tissue)
ENST00000515961.1 ENST00000515961.1_38_58_+ 38–58 4.00 4.21 0.01 100.0 RNA5SP486-201 rRNA pseudogene temporal lobe (Tissue)
ENST00000516201.1 ENST00000516201.1_1_30_+ 1–30 1008.00 72.47 2.06 100.0 SCARNA5-201 scaRNA temporal lobe (Tissue)
ENST00000516507.1 ENST00000516507.1_1_26_+ 1–26 2205.00 0.42 4.51 100.0 RNY4-201 misc RNA temporal lobe (Tissue)
ENST00000516507.1 ENST00000516507.1_1_90_+ 1–90 11470.00 2.21 23.48 100.0 RNY4-201 misc RNA temporal lobe (Tissue)
ENST00000516507.1 ENST00000516507.1_15_32_+ 15–32 24061.00 4.63 49.25 100.0 RNY4-201 misc RNA temporal lobe (Tissue)
ENST00000516507.1 ENST00000516507.1_1_32_+ 1–32 288583.00 55.52 590.66 97.35 RNY4-201 misc RNA temporal lobe (Tissue)
ENST00000516507.1 ENST00000516507.1_41_93_+ 41–93 3675.00 0.71 7.52 100.0 RNY4-201 misc RNA temporal lobe (Tissue)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 33681.00 6.48 68.94 87.87 RNY4-201 misc RNA temporal lobe (Tissue)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 82.00 0.02 0.17 100.0 RNY4-201 misc RNA temporal lobe (Tissue)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 2885.00 0.56 5.90 74.32 RNY4-201 misc RNA temporal lobe (Tissue)
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 45908.00 8.83 93.96 92.01 RNY4-201 misc RNA temporal lobe (Tissue)
ENST00000516507.1 ENST00000516507.1_1_36_+ 1–36 8274.00 1.59 16.93 51.29 RNY4-201 misc RNA temporal lobe (Tissue)
ENST00000516507.1 ENST00000516507.1_1_48_+ 1–48 5376.00 1.03 11.00 100.0 RNY4-201 misc RNA temporal lobe (Tissue)
ENST00000516507.1 ENST00000516507.1_54_93_+ 54–93 931.00 0.18 1.91 30.55 RNY4-201 misc RNA temporal lobe (Tissue)
ENST00000517927.2 ENST00000517927.2_384_405_+ 384–405 1374.00 82.77 2.81 89.57 MIR3142HG-201 lncRNA temporal lobe (Tissue)