ENCFF001RMC

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000521127.2 ENST00000521127.2_334_410_+ 334–410 8732.00 79.40 17.87 100.0 SNHG6-204 retained intron temporal lobe (Tissue)
ENST00000521276.3 ENST00000521276.3_47_68_+ 47–68 30238.00 43.47 61.89 81.65 MIR151A-201 miRNA temporal lobe (Tissue)
ENST00000521276.3 ENST00000521276.3_11_31_+ 11–31 29623.00 42.59 60.63 100.0 MIR151A-201 miRNA temporal lobe (Tissue)
ENST00000523308.5 ENST00000523308.5_614_626_+ 614–626 1894.00 94.14 3.88 100.0 DENND3-221 protein coding temporal lobe (Tissue)
ENST00000525239.5 ENST00000525239.5_155_187_+ 155–187 2240.00 0.87 4.58 100.0 WDR74-204 protein coding temporal lobe (Tissue)
ENST00000525239.5 ENST00000525239.5_78_116_+ 78–116 531.00 0.21 1.09 100.0 WDR74-204 protein coding temporal lobe (Tissue)
ENST00000525239.5 ENST00000525239.5_93_116_+ 93–116 351.00 0.14 0.72 71.49 WDR74-204 protein coding temporal lobe (Tissue)
ENST00000525239.5 ENST00000525239.5_50_116_+ 50–116 30.00 0.01 0.06 100.0 WDR74-204 protein coding temporal lobe (Tissue)
ENST00000525239.5 ENST00000525239.5_90_116_+ 90–116 87.00 0.03 0.18 59.59 WDR74-204 protein coding temporal lobe (Tissue)
ENST00000525239.5 ENST00000525239.5_93_187_+ 93–187 4931.00 1.92 10.09 74.83 WDR74-204 protein coding temporal lobe (Tissue)
ENST00000525239.5 ENST00000525239.5_22_116_+ 22–116 1639.00 0.64 3.35 100.0 WDR74-204 protein coding temporal lobe (Tissue)
ENST00000525239.5 ENST00000525239.5_88_116_+ 88–116 59.00 0.02 0.12 40.41 WDR74-204 protein coding temporal lobe (Tissue)
ENST00000527983.5 ENST00000527983.5_1320_1408_+ 1320–1408 7976.00 77.56 16.32 100.0 HSPA8-211 retained intron temporal lobe (Tissue)
ENST00000530422.1 ENST00000530422.1_78_109_+ 78–109 1321.00 17.47 2.70 100.0 SCARNA9-201 lncRNA temporal lobe (Tissue)
ENST00000530769.5 ENST00000530769.5_2551_2618_+ 2551–2618 76686.00 90.99 156.96 100.0 TAF1D-215 retained intron temporal lobe (Tissue)
ENST00000530769.5 ENST00000530769.5_2550_2623_+ 2550–2623 394.00 0.47 0.81 100.0 TAF1D-215 retained intron temporal lobe (Tissue)
ENST00000532091.1 ENST00000532091.1_1164_1221_+ 1164–1221 2269.00 18.57 4.64 100.0 HSPA8-215 retained intron temporal lobe (Tissue)
ENST00000532091.1 ENST00000532091.1_1133_1221_+ 1133–1221 6721.00 55.01 13.76 100.0 HSPA8-215 retained intron temporal lobe (Tissue)
ENST00000532091.1 ENST00000532091.1_1128_1221_+ 1128–1221 24.00 0.20 0.05 100.0 HSPA8-215 retained intron temporal lobe (Tissue)
ENST00000533872.5 ENST00000533872.5_427_507_+ 427–507 235.00 9.68 0.48 100.0 RPS2-215 retained intron temporal lobe (Tissue)
ENST00000548801.1 ENST00000548801.1_2334_2355_+ 2334–2355 867.00 85.50 1.77 88.38 ENST00000548801 lncRNA temporal lobe (Tissue)
ENST00000554988.2 ENST00000554988.2_275_368_+ 275–368 1048.00 6.48 2.14 100.0 ENST00000554988 lncRNA temporal lobe (Tissue)
ENST00000554988.2 ENST00000554988.2_275_334_+ 275–334 3261.00 20.16 6.67 100.0 ENST00000554988 lncRNA temporal lobe (Tissue)
ENST00000554988.2 ENST00000554988.2_275_320_+ 275–320 952.00 5.88 1.95 100.0 ENST00000554988 lncRNA temporal lobe (Tissue)
ENST00000557108.6 ENST00000557108.6_4551_4587_+ 4551–4587 1242.00 0.59 2.54 100.0 SNHG14-220 retained intron temporal lobe (Tissue)