ENCFF001RMA

Library Details

Organism: Homo Sapiens
Biosample: skin of body (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGA
Description: Part of ENCODE experiment ENCSR000AGA. The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000570843.1 ENST00000570843.1_7_38_+ 7–38 15656.00 66.87 38.57 100.0 ENST00000570843 lncRNA skin of body (Tissue)
ENST00000572453.1 ENST00000572453.1_1973_1994_+ 1973–1994 6852.00 74.09 16.88 100.0 MIR497HG-207 lncRNA skin of body (Tissue)
ENST00000577164.2 ENST00000577164.2_444_465_+ 444–465 425979.00 99.64 1049.39 99.88 MIR22HG-212 lncRNA skin of body (Tissue)
ENST00000577887.1 ENST00000577887.1_1_53_+ 1–53 541.00 0.60 1.33 68.74 SNORD53B-201 snoRNA skin of body (Tissue)
ENST00000577887.1 ENST00000577887.1_1_51_+ 1–51 246.00 0.27 0.61 31.26 SNORD53B-201 snoRNA skin of body (Tissue)
ENST00000577887.1 ENST00000577887.1_1_76_+ 1–76 84027.00 92.71 207.00 95.1 SNORD53B-201 snoRNA skin of body (Tissue)
ENST00000578036.5 ENST00000578036.5_3605_3616_+ 3605–3616 1622.00 88.01 4.00 100.0 ENST00000578036 lncRNA skin of body (Tissue)
ENST00000578181.1 ENST00000578181.1_477_541_+ 477–541 6753.00 88.30 16.64 100.0 RPL23A-207 protein coding skin of body (Tissue)
ENST00000578242.1 ENST00000578242.1_11_31_+ 11–31 1382.00 82.85 3.40 100.0 MIR744-201 miRNA skin of body (Tissue)
ENST00000578683.1 ENST00000578683.1_11_30_+ 11–30 340.00 63.91 0.84 100.0 MIR378C-201 miRNA skin of body (Tissue)
ENST00000579003.2 ENST00000579003.2_1219_1238_+ 1219–1238 5849.00 73.21 14.41 82.54 MIR142HG-201 lncRNA skin of body (Tissue)
ENST00000579003.2 ENST00000579003.2_1257_1279_+ 1257–1279 25.00 0.31 0.06 100.0 MIR142HG-201 lncRNA skin of body (Tissue)
ENST00000579003.2 ENST00000579003.2_1221_1241_+ 1221–1241 393.00 4.92 0.97 18.09 MIR142HG-201 lncRNA skin of body (Tissue)
ENST00000580533.1 ENST00000580533.1_1_91_+ 1–91 452.00 2.19 1.11 100.0 SNORD3C-201 snoRNA skin of body (Tissue)
ENST00000580755.1 ENST00000580755.1_131_197_+ 131–197 283.50 0.16 0.70 58.82 RPL23A-208 retained intron skin of body (Tissue)
ENST00000580755.1 ENST00000580755.1_131_199_+ 131–199 216.54 0.12 0.53 56.39 RPL23A-208 retained intron skin of body (Tissue)
ENST00000580755.1 ENST00000580755.1_132_190_+ 132–190 130982.00 74.89 322.67 88.19 RPL23A-208 retained intron skin of body (Tissue)
ENST00000580755.1 ENST00000580755.1_131_193_+ 131–193 40513.00 23.16 99.80 91.81 RPL23A-208 retained intron skin of body (Tissue)
ENST00000581072.6 ENST00000581072.6_810_831_+ 810–831 28.00 0.77 0.07 100.0 MIR133A1HG-202 lncRNA skin of body (Tissue)
ENST00000581305.1 ENST00000581305.1_509_570_+ 509–570 6643.00 2.43 16.36 35.62 RPL17-211 retained intron skin of body (Tissue)
ENST00000581305.1 ENST00000581305.1_127_189_+ 127–189 26613.00 9.75 65.56 42.14 RPL17-211 retained intron skin of body (Tissue)
ENST00000581305.1 ENST00000581305.1_127_196_+ 127–196 858.00 0.31 2.11 100.0 RPL17-211 retained intron skin of body (Tissue)
ENST00000581305.1 ENST00000581305.1_127_192_+ 127–192 166411.00 60.96 409.95 95.93 RPL17-211 retained intron skin of body (Tissue)
ENST00000581305.1 ENST00000581305.1_509_573_+ 509–573 63803.00 23.37 157.18 97.2 RPL17-211 retained intron skin of body (Tissue)
ENST00000582320.4 ENST00000582320.4_575_597_+ 575–597 53598.00 63.30 132.04 80.66 ENST00000582320 lncRNA skin of body (Tissue)