ENCFF001RMA

Library Details

Organism: Homo Sapiens
Biosample: skin of body (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGA
Description: Part of ENCODE experiment ENCSR000AGA. The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000251287.3 ENST00000251287.3_396_409_+ 396–409 2.00 3.23 0.00 100.0 HCN2-201 protein coding skin of body (Tissue)
ENST00000261038.6 ENST00000261038.6_3100_3122_+ 3100–3122 414.00 84.66 1.02 100.0 SLC49A4-201 protein coding skin of body (Tissue)
ENST00000284727.9 ENST00000284727.9_2255_2286_+ 2255–2286 532.00 13.40 1.31 100.0 ATP5MC3-201 protein coding skin of body (Tissue)
ENST00000302506.8 ENST00000302506.8_1928_1942_+ 1928–1942 1252.00 97.43 3.08 100.0 CDC25A-201 protein coding skin of body (Tissue)
ENST00000308873.11 ENST00000308873.11_348_362_+ 348–362 1.00 2.44 0.00 100.0 RUNX3-201 protein coding skin of body (Tissue)
ENST00000320776.5 ENST00000320776.5_289_301_+ 289–301 41.00 51.90 0.10 100.0 BLOC1S4-201 protein coding skin of body (Tissue)
ENST00000321990.5 ENST00000321990.5_6301_6324_+ 6301–6324 526.00 14.08 1.30 100.0 ATAD5-201 protein coding skin of body (Tissue)
ENST00000325089.7 ENST00000325089.7_9_20_+ 9–20 936.00 42.09 2.31 100.0 SLITRK5-201 protein coding skin of body (Tissue)
ENST00000325418.5 ENST00000325418.5_207_220_+ 207–220 18.00 38.30 0.04 100.0 HASPIN-201 protein coding skin of body (Tissue)
ENST00000327423.11 ENST00000327423.11_9327_9339_+ 9327–9339 608.00 67.03 1.50 100.0 PRR14L-201 protein coding skin of body (Tissue)
ENST00000336854.9 ENST00000336854.9_1124_1136_+ 1124–1136 3899.00 96.34 9.61 100.0 ATG101-201 protein coding skin of body (Tissue)
ENST00000345127.9 ENST00000345127.9_4554_4567_+ 4554–4567 5119.00 87.28 12.61 100.0 PRICKLE1-201 protein coding skin of body (Tissue)
ENST00000347538.2 ENST00000347538.2_59_81_+ 59–81 3378.00 93.37 8.32 95.59 MIR133A2-201 miRNA skin of body (Tissue)
ENST00000358769.7 ENST00000358769.7_52_66_+ 52–66 26.00 21.49 0.06 100.0 PBLD-204 protein coding skin of body (Tissue)
ENST00000360737.4 ENST00000360737.4_3384_3405_+ 3384–3405 909990.00 90.15 2241.73 99.12 MIRLET7BHG-201 lncRNA skin of body (Tissue)
ENST00000360737.4 ENST00000360737.4_4323_4344_+ 4323–4344 63937.00 6.33 157.51 92.23 MIRLET7BHG-201 lncRNA skin of body (Tissue)
ENST00000362103.4 ENST00000362103.4_40_61_+ 40–61 2868.00 97.48 7.07 98.83 MIR375-201 miRNA skin of body (Tissue)
ENST00000362103.4 ENST00000362103.4_40_58_+ 40–58 32.00 1.09 0.08 36.78 MIR375-201 miRNA skin of body (Tissue)
ENST00000362104.3 ENST00000362104.3_59_80_+ 59–80 9034.00 67.81 22.26 100.0 MIR30E-201 miRNA skin of body (Tissue)
ENST00000362104.3 ENST00000362104.3_17_40_+ 17–40 2802.00 21.03 6.90 100.0 MIR30E-201 miRNA skin of body (Tissue)
ENST00000362111.4 ENST00000362111.4_42_63_+ 42–63 169.00 59.72 0.42 100.0 MIR29A-201 miRNA skin of body (Tissue)
ENST00000362114.1 ENST00000362114.1_18_39_+ 18–39 1125.00 79.45 2.77 100.0 MIR345-201 miRNA skin of body (Tissue)
ENST00000362117.1 ENST00000362117.1_10_31_+ 10–31 146213.00 98.21 360.19 100.0 MIR16-2-201 miRNA skin of body (Tissue)
ENST00000362125.3 ENST00000362125.3_58_80_+ 58–80 255.00 3.35 0.63 100.0 MIR340-201 miRNA skin of body (Tissue)
ENST00000362125.3 ENST00000362125.3_16_37_+ 16–37 7031.00 92.27 17.32 100.0 MIR340-201 miRNA skin of body (Tissue)