ENCFF001RMA

Library Details

Organism: Homo Sapiens
Biosample: skin of body (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGA
Description: Part of ENCODE experiment ENCSR000AGA. The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000554988.2 ENST00000554988.2_275_368_+ 275–368 1281.00 15.13 3.16 100.0 ENST00000554988 lncRNA skin of body (Tissue)
ENST00000557108.6 ENST00000557108.6_4551_4587_+ 4551–4587 448.00 0.81 1.10 100.0 SNHG14-220 retained intron skin of body (Tissue)
ENST00000557108.6 ENST00000557108.6_4526_4587_+ 4526–4587 23684.00 42.72 58.34 100.0 SNHG14-220 retained intron skin of body (Tissue)
ENST00000557108.6 ENST00000557108.6_1419_1490_+ 1419–1490 28386.00 51.20 69.93 100.0 SNHG14-220 retained intron skin of body (Tissue)
ENST00000557108.6 ENST00000557108.6_4525_4590_+ 4525–4590 386.00 0.70 0.95 100.0 SNHG14-220 retained intron skin of body (Tissue)
ENST00000559466.1 ENST00000559466.1_665_676_+ 665–676 3270.00 99.66 8.06 100.0 TEKT4P2-201 transcribed unprocessed pseudogene skin of body (Tissue)
ENST00000561554.5 ENST00000561554.5_316_344_+ 316–344 558.00 0.32 1.37 100.0 RPL4-202 retained intron skin of body (Tissue)
ENST00000561554.5 ENST00000561554.5_276_321_+ 276–321 34.00 0.02 0.08 100.0 RPL4-202 retained intron skin of body (Tissue)
ENST00000561554.5 ENST00000561554.5_276_344_+ 276–344 160473.00 91.49 395.32 98.53 RPL4-202 retained intron skin of body (Tissue)
ENST00000561554.5 ENST00000561554.5_276_317_+ 276–317 253.00 0.14 0.62 100.0 RPL4-202 retained intron skin of body (Tissue)
ENST00000561554.5 ENST00000561554.5_311_344_+ 311–344 1781.00 1.02 4.39 100.0 RPL4-202 retained intron skin of body (Tissue)
ENST00000563103.1 ENST00000563103.1_221_256_+ 221–256 150.00 0.27 0.37 100.0 ENST00000563103 lncRNA skin of body (Tissue)
ENST00000564647.5 ENST00000564647.5_345_386_+ 345–386 60.00 0.58 0.15 100.0 RPL4-207 retained intron skin of body (Tissue)
ENST00000564647.5 ENST00000564647.5_318_386_+ 318–386 7069.00 68.00 17.41 100.0 RPL4-207 retained intron skin of body (Tissue)
ENST00000565336.1 ENST00000565336.1_451_487_+ 451–487 49517.00 82.40 121.98 96.8 ENST00000565336 lncRNA skin of body (Tissue)
ENST00000565336.1 ENST00000565336.1_446_487_+ 446–487 4169.00 6.94 10.27 75.17 ENST00000565336 lncRNA skin of body (Tissue)
ENST00000565907.1 ENST00000565907.1_307_381_+ 307–381 385302.00 84.25 949.18 88.0 RBMX-210 retained intron skin of body (Tissue)
ENST00000565907.1 ENST00000565907.1_307_354_+ 307–354 2256.00 0.49 5.56 100.0 RBMX-210 retained intron skin of body (Tissue)
ENST00000565907.1 ENST00000565907.1_307_388_+ 307–388 691.00 0.15 1.70 100.0 RBMX-210 retained intron skin of body (Tissue)
ENST00000565907.1 ENST00000565907.1_307_350_+ 307–350 3971.00 0.87 9.78 100.0 RBMX-210 retained intron skin of body (Tissue)
ENST00000567229.5 ENST00000567229.5_485_573_+ 485–573 8200.00 64.09 20.20 100.0 RPL4-214 retained intron skin of body (Tissue)
ENST00000567229.5 ENST00000567229.5_1097_1162_+ 1097–1162 923.00 7.21 2.27 100.0 RPL4-214 retained intron skin of body (Tissue)
ENST00000569473.1 ENST00000569473.1_47_96_+ 47–96 516.00 1.21 1.27 100.0 POLG-DT-202 lncRNA skin of body (Tissue)
ENST00000569473.1 ENST00000569473.1_59_96_+ 59–96 13445.55 31.47 33.12 47.07 POLG-DT-202 lncRNA skin of body (Tissue)
ENST00000569473.1 ENST00000569473.1_61_96_+ 61–96 15702.96 36.75 38.68 52.77 POLG-DT-202 lncRNA skin of body (Tissue)