ENCFF001RLY

Library Details

Organism: Homo Sapiens
Biosample: diencephalon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFR
Description: Part of ENCODE experiment ENCSR000AFR. The libraries contained in this experiment come from human fetal diencephalon tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364809.1 ENST00000364809.1_2_81_+ 2–81 52412.00 39.89 149.53 100.0 SNORD115-15-201 snoRNA diencephalon (Tissue)
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 440.00 15.70 1.26 100.0 SNORD113-3-201 snoRNA diencephalon (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 8451.00 73.87 24.11 100.0 SNORD52-201 snoRNA diencephalon (Tissue)
ENST00000364915.1 ENST00000364915.1_2_74_+ 2–74 2360.00 37.72 6.73 59.27 SNORD117-201 snoRNA diencephalon (Tissue)
ENST00000364915.1 ENST00000364915.1_1_76_+ 1–76 1622.00 25.93 4.63 49.79 SNORD117-201 snoRNA diencephalon (Tissue)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 78615.00 89.23 224.28 97.59 SNORD114-3-201 snoRNA diencephalon (Tissue)
ENST00000364969.1 ENST00000364969.1_4_62_+ 4–62 2271.00 2.58 6.48 100.0 SNORD114-3-201 snoRNA diencephalon (Tissue)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 2180.00 2.47 6.22 100.0 SNORD114-3-201 snoRNA diencephalon (Tissue)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 20.00 0.76 0.06 100.0 RNA5SP298-201 rRNA pseudogene diencephalon (Tissue)
ENST00000365037.1 ENST00000365037.1_2_82_+ 2–82 55425.00 48.88 158.12 100.0 SNORD115-38-201 snoRNA diencephalon (Tissue)
ENST00000365073.1 ENST00000365073.1_2_81_+ 2–81 98536.00 54.86 281.11 100.0 SNORD115-10-201 snoRNA diencephalon (Tissue)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 22446.00 84.30 64.04 100.0 SNORD113-9-201 snoRNA diencephalon (Tissue)
ENST00000365099.1 ENST00000365099.1_2_82_+ 2–82 10876.00 46.54 31.03 100.0 SNORD115-20-201 snoRNA diencephalon (Tissue)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 117.00 0.95 0.33 100.0 SNORD38A-201 snoRNA diencephalon (Tissue)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 11289.00 91.69 32.21 100.0 SNORD38A-201 snoRNA diencephalon (Tissue)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 394.00 3.20 1.12 100.0 SNORD38A-201 snoRNA diencephalon (Tissue)
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 104210.00 91.31 297.30 98.0 SNORD114-20-201 snoRNA diencephalon (Tissue)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 920.00 4.59 2.62 61.5 7SK.1-201 misc RNA diencephalon (Tissue)
ENST00000365328.1 ENST00000365328.1_260_331_+ 260–331 226.00 1.13 0.64 100.0 7SK.1-201 misc RNA diencephalon (Tissue)
ENST00000365328.1 ENST00000365328.1_1_76_+ 1–76 988.00 4.92 2.82 100.0 7SK.1-201 misc RNA diencephalon (Tissue)
ENST00000365328.1 ENST00000365328.1_246_331_+ 246–331 1498.00 7.47 4.27 100.0 7SK.1-201 misc RNA diencephalon (Tissue)
ENST00000365328.1 ENST00000365328.1_1_63_+ 1–63 665.00 3.31 1.90 36.7 7SK.1-201 misc RNA diencephalon (Tissue)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 25.00 0.12 0.07 100.0 7SK.1-201 misc RNA diencephalon (Tissue)
ENST00000365328.1 ENST00000365328.1_238_331_+ 238–331 2753.00 13.72 7.85 100.0 7SK.1-201 misc RNA diencephalon (Tissue)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 2268.00 11.30 6.47 79.75 7SK.1-201 misc RNA diencephalon (Tissue)