ENCFF001RLY

Library Details

Organism: Homo Sapiens
Biosample: diencephalon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFR
Description: Part of ENCODE experiment ENCSR000AFR. The libraries contained in this experiment come from human fetal diencephalon tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364079.1 ENST00000364079.1_2_82_+ 2–82 26123.00 46.12 74.53 100.0 SNORD115-32-201 snoRNA diencephalon (Tissue)
ENST00000364117.1 ENST00000364117.1_2_82_+ 2–82 22602.00 42.57 64.48 100.0 SNORD115-30-201 snoRNA diencephalon (Tissue)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 1329.00 1.00 3.79 100.0 RNY1-201 misc RNA diencephalon (Tissue)
ENST00000364228.1 ENST00000364228.1_24_109_+ 24–109 25024.00 18.87 71.39 100.0 RNY1-201 misc RNA diencephalon (Tissue)
ENST00000364228.1 ENST00000364228.1_1_39_+ 1–39 1631.00 1.23 4.65 100.0 RNY1-201 misc RNA diencephalon (Tissue)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 38553.47 29.07 109.99 71.63 RNY1-201 misc RNA diencephalon (Tissue)
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 10661.42 8.04 30.42 30.26 RNY1-201 misc RNA diencephalon (Tissue)
ENST00000364273.1 ENST00000364273.1_2_82_+ 2–82 43707.00 36.44 124.69 100.0 SNORD115-42-201 snoRNA diencephalon (Tissue)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 960.00 5.44 2.74 100.0 RNA5SP202-201 rRNA pseudogene diencephalon (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 1374.72 7.79 3.92 42.55 RNA5SP202-201 rRNA pseudogene diencephalon (Tissue)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 202.35 1.15 0.58 12.77 RNA5SP202-201 rRNA pseudogene diencephalon (Tissue)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 81.00 0.46 0.23 100.0 RNA5SP202-201 rRNA pseudogene diencephalon (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 1197.86 6.79 3.42 76.2 RNA5SP202-201 rRNA pseudogene diencephalon (Tissue)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 232.00 1.31 0.66 100.0 RNA5SP202-201 rRNA pseudogene diencephalon (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 41.00 0.23 0.12 100.0 RNA5SP202-201 rRNA pseudogene diencephalon (Tissue)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 12.00 0.07 0.03 100.0 RNA5SP202-201 rRNA pseudogene diencephalon (Tissue)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 397.00 2.25 1.13 100.0 RNA5SP202-201 rRNA pseudogene diencephalon (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 14666.00 41.35 41.84 100.0 SNORD114-9-201 snoRNA diencephalon (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 16189.00 45.64 46.19 100.0 SNORD114-9-201 snoRNA diencephalon (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 586.00 1.05 1.67 100.0 Y_RNA.234-201 misc RNA diencephalon (Tissue)
ENST00000364451.1 ENST00000364451.1_1_95_+ 1–95 43.00 0.25 0.12 100.0 RNA5S9-201 rRNA diencephalon (Tissue)
ENST00000364461.1 ENST00000364461.1_2_82_+ 2–82 13576.00 53.16 38.73 100.0 SNORD115-23-201 snoRNA diencephalon (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 36.00 0.72 0.10 100.0 RNA5SP141-201 rRNA pseudogene diencephalon (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 873.00 54.19 2.49 100.0 SNORD114-15-201 snoRNA diencephalon (Tissue)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 1014.00 41.27 2.89 100.0 ENST00000364722 snoRNA diencephalon (Tissue)