ENCFF001RLY

Library Details

Organism: Homo Sapiens
Biosample: diencephalon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFR
Description: Part of ENCODE experiment ENCSR000AFR. The libraries contained in this experiment come from human fetal diencephalon tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365328.1 ENST00000365328.1_246_331_+ 246–331 1498.00 7.47 4.27 100.0 7SK.1-201 misc RNA diencephalon (Tissue)
ENST00000365382.1 ENST00000365382.1_1_88_+ 1–88 1355.00 63.02 3.87 100.0 SNORD14C-201 snoRNA diencephalon (Tissue)
ENST00000365391.1 ENST00000365391.1_2_82_+ 2–82 59745.00 51.63 170.45 100.0 SNORD115-44-201 snoRNA diencephalon (Tissue)
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 29.00 5.26 0.08 100.0 RNA5SP77-201 rRNA pseudogene diencephalon (Tissue)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 33844.00 18.80 96.55 100.0 SNORD114-22-201 snoRNA diencephalon (Tissue)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 141107.00 78.37 402.57 99.37 SNORD114-22-201 snoRNA diencephalon (Tissue)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 660.00 4.95 1.88 100.0 SNORD6-201 snoRNA diencephalon (Tissue)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 11798.00 88.48 33.66 100.0 SNORD6-201 snoRNA diencephalon (Tissue)
ENST00000365484.1 ENST00000365484.1_1_95_+ 1–95 554.00 1.46 1.58 100.0 RNY3-201 misc RNA diencephalon (Tissue)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 19350.00 58.16 55.20 98.44 SNORD82-201 snoRNA diencephalon (Tissue)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 283.00 0.85 0.81 100.0 SNORD82-201 snoRNA diencephalon (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 2596.00 7.80 7.41 86.33 SNORD82-201 snoRNA diencephalon (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 4012.02 12.06 11.45 52.33 SNORD82-201 snoRNA diencephalon (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 3788.42 11.39 10.81 49.41 SNORD82-201 snoRNA diencephalon (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 376.00 1.13 1.07 100.0 SNORD82-201 snoRNA diencephalon (Tissue)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 125.00 0.38 0.36 100.0 SNORD82-201 snoRNA diencephalon (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 7133.00 96.39 20.35 98.13 MIR146B-201 miRNA diencephalon (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 78.00 48.45 0.22 100.0 SNHG20-201 lncRNA diencephalon (Tissue)
ENST00000369825.6 ENST00000369825.6_405_425_+ 405–425 116.00 9.09 0.33 100.0 ATP5MK-205 protein coding diencephalon (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 261.00 20.45 0.74 100.0 ATP5MK-205 protein coding diencephalon (Tissue)
ENST00000377186.4 ENST00000377186.4_697_717_+ 697–717 9.00 4.27 0.03 100.0 LINC01556-201 lncRNA diencephalon (Tissue)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 12.00 18.18 0.03 100.0 ATAD3A-202 protein coding diencephalon (Tissue)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 3226.00 58.79 9.20 75.06 TMC5-202 protein coding diencephalon (Tissue)
ENST00000382874.6 ENST00000382874.6_779_809_+ 779–809 11.00 22.92 0.03 100.0 ZMYM2-203 protein coding diencephalon (Tissue)
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 433.00 4.76 1.24 100.0 RNVU1-7-201 snRNA diencephalon (Tissue)