ENCFF001RLY

Library Details

Organism: Homo Sapiens
Biosample: diencephalon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFR
Description: Part of ENCODE experiment ENCSR000AFR. The libraries contained in this experiment come from human fetal diencephalon tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362883.1 ENST00000362883.1_10_70_+ 10–70 301.00 8.05 0.86 100.0 SNORD104-201 snoRNA diencephalon (Tissue)
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 304.00 8.13 0.87 100.0 SNORD104-201 snoRNA diencephalon (Tissue)
ENST00000362912.1 ENST00000362912.1_2_82_+ 2–82 171249.00 66.66 488.56 97.31 SNORD115-9-201 snoRNA diencephalon (Tissue)
ENST00000362973.1 ENST00000362973.1_96_117_+ 96–117 2731.00 33.26 7.79 79.64 RNA5SP358-201 rRNA pseudogene diencephalon (Tissue)
ENST00000363124.1 ENST00000363124.1_17_32_+ 17–32 85.00 0.98 0.24 80.95 RNA5SP145-201 rRNA pseudogene diencephalon (Tissue)
ENST00000363182.1 ENST00000363182.1_1_32_+ 1–32 7442.00 31.30 21.23 100.0 Y_RNA.105-201 misc RNA diencephalon (Tissue)
ENST00000363194.1 ENST00000363194.1_1_32_+ 1–32 8917.00 29.39 25.44 100.0 RNY4P9-201 misc RNA diencephalon (Tissue)
ENST00000363286.1 ENST00000363286.1_63_116_+ 63–116 1536.00 5.80 4.38 100.0 RNU5B-1-201 snRNA diencephalon (Tissue)
ENST00000363286.1 ENST00000363286.1_55_116_+ 55–116 1020.00 3.85 2.91 100.0 RNU5B-1-201 snRNA diencephalon (Tissue)
ENST00000363286.1 ENST00000363286.1_68_116_+ 68–116 1357.00 5.13 3.87 100.0 RNU5B-1-201 snRNA diencephalon (Tissue)
ENST00000363286.1 ENST00000363286.1_1_78_+ 1–78 2631.00 9.94 7.51 74.09 RNU5B-1-201 snRNA diencephalon (Tissue)
ENST00000363286.1 ENST00000363286.1_1_69_+ 1–69 154.00 0.58 0.44 100.0 RNU5B-1-201 snRNA diencephalon (Tissue)
ENST00000363286.1 ENST00000363286.1_1_86_+ 1–86 5159.00 19.50 14.72 100.0 RNU5B-1-201 snRNA diencephalon (Tissue)
ENST00000363293.1 ENST00000363293.1_2_82_+ 2–82 479229.00 94.45 1367.20 98.62 SNORD115-18-201 snoRNA diencephalon (Tissue)
ENST00000363341.1 ENST00000363341.1_1_32_+ 1–32 264675.00 87.59 755.09 97.62 RNY4P27-201 misc RNA diencephalon (Tissue)
ENST00000363341.1 ENST00000363341.1_1_36_+ 1–36 4010.00 1.33 11.44 38.34 RNY4P27-201 misc RNA diencephalon (Tissue)
ENST00000363444.1 ENST00000363444.1_74_99_+ 74–99 10088.00 38.63 28.78 100.0 Y_RNA.136-201 misc RNA diencephalon (Tissue)
ENST00000363608.1 ENST00000363608.1_2_82_+ 2–82 85121.00 52.94 242.84 100.0 SNORD115-41-201 snoRNA diencephalon (Tissue)
ENST00000363633.1 ENST00000363633.1_2_82_+ 2–82 95521.00 54.04 272.51 100.0 SNORD115-5-201 snoRNA diencephalon (Tissue)
ENST00000363723.1 ENST00000363723.1_2_82_+ 2–82 23946.00 43.73 68.32 100.0 SNORD115-33-201 snoRNA diencephalon (Tissue)
ENST00000363742.1 ENST00000363742.1_4_67_+ 4–67 29995.00 91.39 85.57 99.55 SNORD114-25-201 snoRNA diencephalon (Tissue)
ENST00000363762.1 ENST00000363762.1_3_72_+ 3–72 57338.00 94.25 163.58 100.0 SNORD113-7-201 snoRNA diencephalon (Tissue)
ENST00000363856.1 ENST00000363856.1_2_82_+ 2–82 30822.00 34.53 87.93 100.0 SNORD115-8-201 snoRNA diencephalon (Tissue)
ENST00000363872.1 ENST00000363872.1_74_98_+ 74–98 4082.00 57.84 11.65 100.0 Y_RNA.181-201 misc RNA diencephalon (Tissue)
ENST00000363887.1 ENST00000363887.1_2_82_+ 2–82 51937.00 40.97 148.17 100.0 SNORD115-16-201 snoRNA diencephalon (Tissue)