ENCFF001RLY

Library Details

Organism: Homo Sapiens
Biosample: diencephalon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFR
Description: Part of ENCODE experiment ENCSR000AFR. The libraries contained in this experiment come from human fetal diencephalon tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 21502.00 72.65 61.34 100.0 Y_RNA.14-201 misc RNA diencephalon (Tissue)
ENST00000362441.1 ENST00000362441.1_2_82_+ 2–82 31798.00 29.84 90.72 100.0 SNORD115-34-201 snoRNA diencephalon (Tissue)
ENST00000362477.1 ENST00000362477.1_70_120_+ 70–120 252.00 21.28 0.72 100.0 RNU5E-1-201 snRNA diencephalon (Tissue)
ENST00000362545.1 ENST00000362545.1_1_85_+ 1–85 5.00 0.06 0.01 2.3 RNA5SP370-201 rRNA pseudogene diencephalon (Tissue)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 62.00 29.95 0.18 100.0 SNORA31-201 snoRNA diencephalon (Tissue)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 41.00 0.47 0.12 87.23 RNA5SP389-201 rRNA pseudogene diencephalon (Tissue)
ENST00000362610.1 ENST00000362610.1_1_76_+ 1–76 18.00 0.21 0.05 100.0 RNA5SP389-201 rRNA pseudogene diencephalon (Tissue)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 125.00 1.44 0.36 89.29 RNA5SP389-201 rRNA pseudogene diencephalon (Tissue)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 7.00 0.08 0.02 100.0 RNA5SP389-201 rRNA pseudogene diencephalon (Tissue)
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 711.00 2.11 2.03 100.0 RNU5A-1-201 snRNA diencephalon (Tissue)
ENST00000362698.1 ENST00000362698.1_60_116_+ 60–116 3306.00 9.83 9.43 74.66 RNU5A-1-201 snRNA diencephalon (Tissue)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 5308.11 15.78 15.14 41.62 RNU5A-1-201 snRNA diencephalon (Tissue)
ENST00000362698.1 ENST00000362698.1_29_116_+ 29–116 1293.00 3.84 3.69 73.42 RNU5A-1-201 snRNA diencephalon (Tissue)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 775.00 2.30 2.21 78.76 RNU5A-1-201 snRNA diencephalon (Tissue)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 734.00 2.18 2.09 57.61 RNU5A-1-201 snRNA diencephalon (Tissue)
ENST00000362698.1 ENST00000362698.1_40_116_+ 40–116 78.00 0.23 0.22 100.0 RNU5A-1-201 snRNA diencephalon (Tissue)
ENST00000362698.1 ENST00000362698.1_36_116_+ 36–116 236.00 0.70 0.67 38.94 RNU5A-1-201 snRNA diencephalon (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 1561.00 4.64 4.45 40.22 RNU5A-1-201 snRNA diencephalon (Tissue)
ENST00000362698.1 ENST00000362698.1_22_116_+ 22–116 610.08 1.81 1.74 63.09 RNU5A-1-201 snRNA diencephalon (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 605.00 1.80 1.73 53.92 RNU5A-1-201 snRNA diencephalon (Tissue)
ENST00000362698.1 ENST00000362698.1_1_78_+ 1–78 814.00 2.42 2.32 100.0 RNU5A-1-201 snRNA diencephalon (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 8157.92 24.25 23.27 66.82 RNU5A-1-201 snRNA diencephalon (Tissue)
ENST00000362698.1 ENST00000362698.1_24_116_+ 24–116 304.28 0.90 0.87 26.53 RNU5A-1-201 snRNA diencephalon (Tissue)
ENST00000362698.1 ENST00000362698.1_34_116_+ 34–116 530.00 1.58 1.51 87.31 RNU5A-1-201 snRNA diencephalon (Tissue)
ENST00000362723.1 ENST00000362723.1_3_71_+ 3–71 7704.00 84.01 21.98 100.0 SNORD114-14-201 snoRNA diencephalon (Tissue)