ENCFF001RLY

Library Details

Organism: Homo Sapiens
Biosample: diencephalon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFR
Description: Part of ENCODE experiment ENCSR000AFR. The libraries contained in this experiment come from human fetal diencephalon tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650796.1 ENST00000650796.1_2858_2925_+ 2858–2925 7123.00 0.89 20.32 100.0 GAS5-230 retained intron diencephalon (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1118_+ 1048–1118 217.00 0.03 0.62 100.0 GAS5-230 retained intron diencephalon (Tissue)
ENST00000651140.1 ENST00000651140.1_696_716_+ 696–716 1505.00 14.80 4.29 100.0 FTX-219 lncRNA diencephalon (Tissue)
ENST00000651140.1 ENST00000651140.1_890_912_+ 890–912 5307.00 52.20 15.14 87.1 FTX-219 lncRNA diencephalon (Tissue)
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 261.00 8.34 0.74 45.87 CTC1-214 protein coding diencephalon (Tissue)
ENST00000651323.1 ENST00000651323.1_5233_5247_+ 5233–5247 6.00 0.19 0.02 9.84 CTC1-214 protein coding diencephalon (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 193.00 6.17 0.55 46.96 CTC1-214 protein coding diencephalon (Tissue)
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 308.00 9.85 0.88 54.13 CTC1-214 protein coding diencephalon (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5177_+ 5163–5177 573.00 18.32 1.63 86.95 CTC1-214 protein coding diencephalon (Tissue)
ENST00000651323.1 ENST00000651323.1_5214_5247_+ 5214–5247 46.00 1.47 0.13 100.0 CTC1-214 protein coding diencephalon (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5185_+ 5163–5185 65.00 2.08 0.19 100.0 CTC1-214 protein coding diencephalon (Tissue)
ENST00000651323.1 ENST00000651323.1_5230_5247_+ 5230–5247 397.00 12.69 1.13 100.0 CTC1-214 protein coding diencephalon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 208.00 0.59 0.59 60.47 ENST00000651540 lncRNA diencephalon (Tissue)
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 1185.00 3.36 3.38 98.26 ENST00000651540 lncRNA diencephalon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 1043.00 2.96 2.98 100.0 ENST00000651540 lncRNA diencephalon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 836.00 2.37 2.39 59.54 ENST00000651540 lncRNA diencephalon (Tissue)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 592.00 1.68 1.69 100.0 ENST00000651540 lncRNA diencephalon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 1018.00 2.89 2.90 100.0 ENST00000651540 lncRNA diencephalon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_79_+ 6–79 789.00 2.24 2.25 100.0 ENST00000651540 lncRNA diencephalon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 717.00 2.03 2.05 100.0 ENST00000651540 lncRNA diencephalon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_88_+ 6–88 1190.00 3.37 3.39 100.0 ENST00000651540 lncRNA diencephalon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 2792.00 7.91 7.97 46.98 ENST00000651540 lncRNA diencephalon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 2593.00 7.35 7.40 100.0 ENST00000651540 lncRNA diencephalon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 9336.00 26.46 26.63 83.09 ENST00000651540 lncRNA diencephalon (Tissue)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 9837.00 1.70 28.06 100.0 MIRLET7A1HG-203 lncRNA diencephalon (Tissue)