ENCFF001RLY

Library Details

Organism: Homo Sapiens
Biosample: diencephalon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFR
Description: Part of ENCODE experiment ENCSR000AFR. The libraries contained in this experiment come from human fetal diencephalon tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 280.00 7.72 0.80 21.89 HSPA9-211 retained intron diencephalon (Tissue)
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 2240.00 89.17 6.39 100.0 DNM3OS-205 lncRNA diencephalon (Tissue)
ENST00000650796.1 ENST00000650796.1_2898_2925_+ 2898–2925 3211.00 0.40 9.16 100.0 GAS5-230 retained intron diencephalon (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 56.00 0.01 0.16 100.0 GAS5-230 retained intron diencephalon (Tissue)
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 958.00 0.12 2.73 100.0 GAS5-230 retained intron diencephalon (Tissue)
ENST00000650796.1 ENST00000650796.1_1648_1723_+ 1648–1723 695.00 0.09 1.98 79.43 GAS5-230 retained intron diencephalon (Tissue)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 4825.00 0.60 13.77 95.3 GAS5-230 retained intron diencephalon (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 15.00 0.00 0.04 100.0 GAS5-230 retained intron diencephalon (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 268.00 0.03 0.76 100.0 GAS5-230 retained intron diencephalon (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 1050.00 0.13 3.00 100.0 GAS5-230 retained intron diencephalon (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 650850.00 81.47 1856.81 99.83 GAS5-230 retained intron diencephalon (Tissue)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 740.00 0.09 2.11 100.0 GAS5-230 retained intron diencephalon (Tissue)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 1275.00 0.16 3.64 100.0 GAS5-230 retained intron diencephalon (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 1010.00 0.13 2.88 100.0 GAS5-230 retained intron diencephalon (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 1038.00 0.13 2.96 100.0 GAS5-230 retained intron diencephalon (Tissue)
ENST00000650796.1 ENST00000650796.1_1049_1079_+ 1049–1079 1077.00 0.13 3.07 100.0 GAS5-230 retained intron diencephalon (Tissue)
ENST00000650796.1 ENST00000650796.1_157_198_+ 157–198 207.00 0.03 0.59 100.0 GAS5-230 retained intron diencephalon (Tissue)
ENST00000650796.1 ENST00000650796.1_160_197_+ 160–197 149.00 0.02 0.43 100.0 GAS5-230 retained intron diencephalon (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1086_+ 1048–1086 182.00 0.02 0.52 100.0 GAS5-230 retained intron diencephalon (Tissue)
ENST00000650796.1 ENST00000650796.1_2890_2925_+ 2890–2925 3515.00 0.44 10.03 79.26 GAS5-230 retained intron diencephalon (Tissue)
ENST00000650796.1 ENST00000650796.1_363_440_+ 363–440 16876.00 2.11 48.15 100.0 GAS5-230 retained intron diencephalon (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2707_+ 2631–2707 22917.00 2.87 65.38 94.89 GAS5-230 retained intron diencephalon (Tissue)
ENST00000650796.1 ENST00000650796.1_2172_2243_+ 2172–2243 61046.00 7.64 174.16 100.0 GAS5-230 retained intron diencephalon (Tissue)
ENST00000650796.1 ENST00000650796.1_400_440_+ 400–440 153.00 0.02 0.44 100.0 GAS5-230 retained intron diencephalon (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1452_+ 1391–1452 2407.00 0.30 6.87 100.0 GAS5-230 retained intron diencephalon (Tissue)