ENCFF001RLY

Library Details

Organism: Homo Sapiens
Biosample: diencephalon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFR
Description: Part of ENCODE experiment ENCSR000AFR. The libraries contained in this experiment come from human fetal diencephalon tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000619323.3 ENST00000619323.3_499_520_+ 499–520 40980.00 95.82 116.91 98.38 ENST00000619323 lncRNA diencephalon (Tissue)
ENST00000625402.1 ENST00000625402.1_2_49_+ 2–49 182.00 19.42 0.52 100.0 SCARNA4-202 scaRNA diencephalon (Tissue)
ENST00000625572.1 ENST00000625572.1_23_92_+ 23–92 4938.00 75.85 14.09 100.0 ENST00000625572 miRNA diencephalon (Tissue)
ENST00000628177.1 ENST00000628177.1_1_79_+ 1–79 19774.00 95.88 56.41 100.0 ENST00000628177 snoRNA diencephalon (Tissue)
ENST00000630615.1 ENST00000630615.1_10_70_+ 10–70 2445.00 95.25 6.98 100.0 ENST00000630615 snoRNA diencephalon (Tissue)
ENST00000635183.1 ENST00000635183.1_1617_1632_+ 1617–1632 45.00 36.59 0.13 100.0 DMRT2-209 protein coding diencephalon (Tissue)
ENST00000635183.1 ENST00000635183.1_323_334_+ 323–334 19.00 15.45 0.05 100.0 DMRT2-209 protein coding diencephalon (Tissue)
ENST00000636377.1 ENST00000636377.1_38_65_+ 38–65 464.00 8.60 1.32 100.0 SNORD98-201 snoRNA diencephalon (Tissue)
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 4101.00 75.99 11.70 100.0 SNORD98-201 snoRNA diencephalon (Tissue)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 33369.85 32.80 95.20 35.66 MIR106AHG-201 lncRNA diencephalon (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3393_+ 3371–3393 323.70 0.32 0.92 19.91 MIR106AHG-201 lncRNA diencephalon (Tissue)
ENST00000636668.1 ENST00000636668.1_2902_2924_+ 2902–2924 197.00 0.19 0.56 100.0 MIR106AHG-201 lncRNA diencephalon (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3391_+ 3371–3391 1221.76 1.20 3.49 75.14 MIR106AHG-201 lncRNA diencephalon (Tissue)
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 8590.00 48.38 24.51 100.0 MEG8-222 lncRNA diencephalon (Tissue)
ENST00000638012.2 ENST00000638012.2_1_70_+ 1–70 4589.00 25.85 13.09 100.0 MEG8-222 lncRNA diencephalon (Tissue)
ENST00000640631.2 ENST00000640631.2_7388_7482_+ 7388–7482 44499.00 8.38 126.95 95.62 SNHG14-224 lncRNA diencephalon (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4215_+ 4125–4215 168904.00 31.82 481.87 94.39 SNHG14-224 lncRNA diencephalon (Tissue)
ENST00000640631.2 ENST00000640631.2_9465_9551_+ 9465–9551 60478.00 11.39 172.54 100.0 SNHG14-224 lncRNA diencephalon (Tissue)
ENST00000640631.2 ENST00000640631.2_5267_5357_+ 5267–5357 25689.00 4.84 73.29 95.04 SNHG14-224 lncRNA diencephalon (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 1512.00 0.28 4.31 100.0 SNHG14-224 lncRNA diencephalon (Tissue)
ENST00000640631.2 ENST00000640631.2_7389_7479_+ 7389–7479 13406.00 2.53 38.25 47.6 SNHG14-224 lncRNA diencephalon (Tissue)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 124564.00 23.47 355.37 86.27 SNHG14-224 lncRNA diencephalon (Tissue)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 37079.00 6.99 105.78 52.26 SNHG14-224 lncRNA diencephalon (Tissue)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 1756.16 29.86 5.01 69.14 5S_rRNA.20-201 rRNA pseudogene diencephalon (Tissue)
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 373.00 10.29 1.06 100.0 HSPA9-211 retained intron diencephalon (Tissue)