ENCFF001RLY

Library Details

Organism: Homo Sapiens
Biosample: diencephalon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFR
Description: Part of ENCODE experiment ENCSR000AFR. The libraries contained in this experiment come from human fetal diencephalon tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000391150.1 ENST00000391150.1_35_69_+ 35–69 902.00 1.01 2.57 100.0 SNORD69-201 snoRNA diencephalon (Tissue)
ENST00000391150.1 ENST00000391150.1_9_48_+ 9–48 647.00 0.72 1.85 100.0 SNORD69-201 snoRNA diencephalon (Tissue)
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 786.00 0.88 2.24 100.0 SNORD69-201 snoRNA diencephalon (Tissue)
ENST00000391150.1 ENST00000391150.1_9_69_+ 9–69 84591.00 94.30 241.33 100.0 SNORD69-201 snoRNA diencephalon (Tissue)
ENST00000391232.1 ENST00000391232.1_9_80_+ 9–80 1554.00 58.60 4.43 69.59 SNORD70-201 snoRNA diencephalon (Tissue)
ENST00000393354.7 ENST00000393354.7_7988_8016_+ 7988–8016 227.00 6.30 0.65 100.0 B4GALNT2-202 protein coding diencephalon (Tissue)
ENST00000393354.7 ENST00000393354.7_8003_8016_+ 8003–8016 2513.00 69.73 7.17 82.04 B4GALNT2-202 protein coding diencephalon (Tissue)
ENST00000396355.5 ENST00000396355.5_35_56_+ 35–56 1885.00 93.09 5.38 100.0 NDE1-202 protein coding diencephalon (Tissue)
ENST00000401172.1 ENST00000401172.1_46_67_+ 46–67 33.00 82.50 0.09 100.0 MIR208B-201 miRNA diencephalon (Tissue)
ENST00000401182.3 ENST00000401182.3_11_31_+ 11–31 412.00 63.78 1.18 100.0 MIR450B-201 miRNA diencephalon (Tissue)
ENST00000401258.3 ENST00000401258.3_48_71_+ 48–71 736.00 59.69 2.10 100.0 MIR887-201 miRNA diencephalon (Tissue)
ENST00000401280.3 ENST00000401280.3_49_69_+ 49–69 16945.00 92.15 48.34 100.0 MIR889-201 miRNA diencephalon (Tissue)
ENST00000408139.1 ENST00000408139.1_5_91_+ 5–91 3014.00 79.48 8.60 100.0 SNORD111-201 snoRNA diencephalon (Tissue)
ENST00000408314.1 ENST00000408314.1_5_86_+ 5–86 1111.00 65.86 3.17 85.66 SNORD88A-201 snoRNA diencephalon (Tissue)
ENST00000408406.1 ENST00000408406.1_32_53_+ 32–53 268.00 93.71 0.76 100.0 MIR548K-201 miRNA diencephalon (Tissue)
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 372.00 61.18 1.06 100.0 MIR320B2-201 miRNA diencephalon (Tissue)
ENST00000408537.1 ENST00000408537.1_15_35_+ 15–35 3324.00 96.12 9.48 100.0 MIR1271-201 miRNA diencephalon (Tissue)
ENST00000408573.1 ENST00000408573.1_26_71_+ 26–71 31.00 0.12 0.09 100.0 SNORD100-201 snoRNA diencephalon (Tissue)
ENST00000408573.1 ENST00000408573.1_4_71_+ 4–71 22779.00 88.08 64.99 100.0 SNORD100-201 snoRNA diencephalon (Tissue)
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 1248.00 4.83 3.56 100.0 SNORD100-201 snoRNA diencephalon (Tissue)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 241.00 0.93 0.69 100.0 SNORD100-201 snoRNA diencephalon (Tissue)
ENST00000408587.1 ENST00000408587.1_43_74_+ 43–74 760.00 65.57 2.17 100.0 SNORD111B-201 snoRNA diencephalon (Tissue)
ENST00000410361.1 ENST00000410361.1_155_188_+ 155–188 2278.00 54.34 6.50 100.0 RNU2-36P-201 snRNA diencephalon (Tissue)
ENST00000410361.1 ENST00000410361.1_79_116_+ 79–116 32.00 0.76 0.09 100.0 RNU2-36P-201 snRNA diencephalon (Tissue)
ENST00000410413.1 ENST00000410413.1_2_65_+ 2–65 39209.00 96.94 111.86 99.39 SNORD19C-201 snoRNA diencephalon (Tissue)