ENCFF001RLY

Library Details

Organism: Homo Sapiens
Biosample: diencephalon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFR
Description: Part of ENCODE experiment ENCSR000AFR. The libraries contained in this experiment come from human fetal diencephalon tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000410413.1 ENST00000410413.1_2_65_+ 2–65 39209.00 96.94 111.86 99.39 SNORD19C-201 snoRNA diencephalon (Tissue)
ENST00000410433.1 ENST00000410433.1_7_54_+ 7–54 1326.00 1.02 3.78 100.0 SNORD12B-201 snoRNA diencephalon (Tissue)
ENST00000410433.1 ENST00000410433.1_31_84_+ 31–84 170.00 0.13 0.48 100.0 SNORD12B-201 snoRNA diencephalon (Tissue)
ENST00000410433.1 ENST00000410433.1_7_84_+ 7–84 124231.00 95.32 354.42 98.86 SNORD12B-201 snoRNA diencephalon (Tissue)
ENST00000410669.1 ENST00000410669.1_1_32_+ 1–32 27735.00 53.33 79.13 100.0 Y_RNA.609-201 misc RNA diencephalon (Tissue)
ENST00000410717.1 ENST00000410717.1_15_31_+ 15–31 940.00 27.11 2.68 100.0 Y_RNA.612-201 misc RNA diencephalon (Tissue)
ENST00000411292.1 ENST00000411292.1_7_79_+ 7–79 82017.00 96.23 233.99 99.44 SNORD71-201 snoRNA diencephalon (Tissue)
ENST00000411292.1 ENST00000411292.1_6_82_+ 6–82 840.00 0.99 2.40 100.0 SNORD71-201 snoRNA diencephalon (Tissue)
ENST00000411292.1 ENST00000411292.1_51_79_+ 51–79 643.00 0.75 1.83 100.0 SNORD71-201 snoRNA diencephalon (Tissue)
ENST00000413053.2 ENST00000413053.2_1984_2004_+ 1984–2004 8622.00 80.59 24.60 91.92 MIR194-2HG-201 lncRNA diencephalon (Tissue)
ENST00000413053.2 ENST00000413053.2_1985_2007_+ 1985–2007 1405.00 13.13 4.01 53.3 MIR194-2HG-201 lncRNA diencephalon (Tissue)
ENST00000415386.2 ENST00000415386.2_302_374_+ 302–374 24.00 0.42 0.07 100.0 LINC01783-201 lncRNA diencephalon (Tissue)
ENST00000415804.2 ENST00000415804.2_467_487_+ 467–487 33.00 86.84 0.09 100.0 RPS7P15-201 processed pseudogene diencephalon (Tissue)
ENST00000426867.1 ENST00000426867.1_58_86_+ 58–86 41.00 1.05 0.12 100.0 SNORD62B-201 snoRNA diencephalon (Tissue)
ENST00000426867.1 ENST00000426867.1_1_35_+ 1–35 710.00 18.21 2.03 87.65 SNORD62B-201 snoRNA diencephalon (Tissue)
ENST00000426867.1 ENST00000426867.1_26_86_+ 26–86 278.00 7.13 0.79 100.0 SNORD62B-201 snoRNA diencephalon (Tissue)
ENST00000426867.1 ENST00000426867.1_72_86_+ 72–86 670.00 17.18 1.91 100.0 SNORD62B-201 snoRNA diencephalon (Tissue)
ENST00000426867.1 ENST00000426867.1_1_86_+ 1–86 461.00 11.82 1.32 100.0 SNORD62B-201 snoRNA diencephalon (Tissue)
ENST00000432845.1 ENST00000432845.1_2382_2409_+ 2382–2409 23.00 74.19 0.07 100.0 MRPL32-203 nonsense mediated decay diencephalon (Tissue)
ENST00000436739.2 ENST00000436739.2_403_416_+ 403–416 1870.00 98.06 5.33 100.0 ENST00000436739 lncRNA diencephalon (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1267_+ 1182–1267 307.00 5.18 0.88 100.0 TMEM107-204 protein coding diencephalon (Tissue)
ENST00000437139.7 ENST00000437139.7_1209_1267_+ 1209–1267 744.00 12.56 2.12 63.54 TMEM107-204 protein coding diencephalon (Tissue)
ENST00000437139.7 ENST00000437139.7_1225_1267_+ 1225–1267 589.00 9.94 1.68 100.0 TMEM107-204 protein coding diencephalon (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1225_+ 1182–1225 29.00 0.49 0.08 100.0 TMEM107-204 protein coding diencephalon (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1238_+ 1182–1238 117.00 1.97 0.33 68.82 TMEM107-204 protein coding diencephalon (Tissue)