ENCFF001RLY

Library Details

Organism: Homo Sapiens
Biosample: diencephalon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFR
Description: Part of ENCODE experiment ENCSR000AFR. The libraries contained in this experiment come from human fetal diencephalon tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387459.1 ENST00000387459.1_24_69_+ 24–69 589.00 0.30 1.68 100.0 MT-TE-201 Mt tRNA diencephalon (Tissue)
ENST00000387459.1 ENST00000387459.1_1_69_+ 1–69 151991.00 77.28 433.62 92.51 MT-TE-201 Mt tRNA diencephalon (Tissue)
ENST00000387459.1 ENST00000387459.1_1_57_+ 1–57 1240.00 0.63 3.54 100.0 MT-TE-201 Mt tRNA diencephalon (Tissue)
ENST00000387459.1 ENST00000387459.1_1_62_+ 1–62 783.00 0.40 2.23 72.3 MT-TE-201 Mt tRNA diencephalon (Tissue)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 2828.00 10.64 8.07 100.0 MT-RNR1-201 Mt rRNA diencephalon (Tissue)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 2183.00 74.00 6.23 100.0 MIR454-201 miRNA diencephalon (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 640.00 60.26 1.83 100.0 MIR501-201 miRNA diencephalon (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 24035.00 95.04 68.57 100.0 MIR769-201 miRNA diencephalon (Tissue)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 52.00 81.25 0.15 100.0 KRTAP19-1-201 protein coding diencephalon (Tissue)
ENST00000390708.1 ENST00000390708.1_11_33_+ 11–33 691.00 19.35 1.97 100.0 MIR708-201 miRNA diencephalon (Tissue)
ENST00000390725.1 ENST00000390725.1_44_66_+ 44–66 27.00 84.38 0.08 100.0 MIR509-3-201 miRNA diencephalon (Tissue)
ENST00000390751.3 ENST00000390751.3_47_68_+ 47–68 348.00 53.37 0.99 100.0 MIR543-201 miRNA diencephalon (Tissue)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 258.00 94.51 0.74 100.0 MIR301B-201 miRNA diencephalon (Tissue)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 3245.00 60.79 9.26 88.23 RNU1-82P-201 snRNA diencephalon (Tissue)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 2750.00 30.59 7.85 77.36 SNORD66-201 snoRNA diencephalon (Tissue)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 14.00 0.16 0.04 100.0 SNORD66-201 snoRNA diencephalon (Tissue)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 344.00 3.83 0.98 100.0 SNORD66-201 snoRNA diencephalon (Tissue)
ENST00000390856.1 ENST00000390856.1_1_75_+ 1–75 2611.00 29.04 7.45 100.0 SNORD66-201 snoRNA diencephalon (Tissue)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 709.00 82.35 2.02 100.0 U3.17-201 snoRNA diencephalon (Tissue)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 770.00 52.03 2.20 100.0 SNORD17-201 snoRNA diencephalon (Tissue)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 10.00 27.03 0.03 100.0 SNORD72-201 snoRNA diencephalon (Tissue)
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 1669.00 70.39 4.76 100.0 SNORD70B-201 snoRNA diencephalon (Tissue)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 19392.00 76.25 55.32 97.67 RNY4P18-201 misc RNA diencephalon (Tissue)
ENST00000391145.1 ENST00000391145.1_18_97_+ 18–97 92009.00 96.45 262.49 100.0 SNORD90-201 snoRNA diencephalon (Tissue)
ENST00000391145.1 ENST00000391145.1_18_100_+ 18–100 686.00 0.72 1.96 14.56 SNORD90-201 snoRNA diencephalon (Tissue)