ENCFF001RLX

Library Details

Organism: Homo Sapiens
Biosample: spinal cord (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGB
Description: Part of ENCODE experiment ENCSR000AGB. The libraries contained in this experiment come from human fetal spinal cord tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000806893.1 ENST00000806893.1_465_486_+ 465–486 9479.00 0.87 17.38 100.0 MIR181A1HG-212 lncRNA spinal cord (Tissue)
ENST00000812667.1 ENST00000812667.1_308_348_+ 308–348 74.00 4.75 0.14 100.0 C19orf48P-218 lncRNA spinal cord (Tissue)
ENST00000812667.1 ENST00000812667.1_307_393_+ 307–393 620.00 39.77 1.14 100.0 C19orf48P-218 lncRNA spinal cord (Tissue)
ENST00000815283.1 ENST00000815283.1_298_361_+ 298–361 22090.00 87.68 40.51 95.61 SNHG18-220 lncRNA spinal cord (Tissue)
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 536.00 15.41 0.98 100.0 ENST00000817026 lncRNA spinal cord (Tissue)
ENST00000823279.1 ENST00000823279.1_109_169_+ 109–169 4336.33 2.91 7.95 50.84 ENST00000823279 lncRNA spinal cord (Tissue)
ENST00000823279.1 ENST00000823279.1_126_169_+ 126–169 5191.00 3.49 9.52 100.0 ENST00000823279 lncRNA spinal cord (Tissue)
ENST00000823279.1 ENST00000823279.1_103_169_+ 103–169 3071.81 2.06 5.63 38.67 ENST00000823279 lncRNA spinal cord (Tissue)
ENST00000823279.1 ENST00000823279.1_86_169_+ 86–169 2331.00 1.57 4.27 100.0 ENST00000823279 lncRNA spinal cord (Tissue)
ENST00000823279.1 ENST00000823279.1_78_169_+ 78–169 19725.00 13.26 36.17 99.28 ENST00000823279 lncRNA spinal cord (Tissue)
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 5569.20 3.74 10.21 39.21 ENST00000823279 lncRNA spinal cord (Tissue)
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 5469.72 3.68 10.03 44.08 ENST00000823279 lncRNA spinal cord (Tissue)
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 10543.00 7.09 19.33 79.26 ENST00000823279 lncRNA spinal cord (Tissue)
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 16480.78 11.08 30.22 48.52 ENST00000823279 lncRNA spinal cord (Tissue)
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 17042.38 11.46 31.25 46.07 ENST00000823801 lncRNA spinal cord (Tissue)
ENST00000827714.1 ENST00000827714.1_110_129_+ 110–129 1622.00 37.13 2.97 44.43 ENST00000827714 lncRNA spinal cord (Tissue)
ENST00000827714.1 ENST00000827714.1_110_131_+ 110–131 2029.00 46.44 3.72 55.57 ENST00000827714 lncRNA spinal cord (Tissue)
ENST00000828033.1 ENST00000828033.1_252_322_+ 252–322 1582.00 4.78 2.90 100.0 GAS5-377 lncRNA spinal cord (Tissue)
ENST00000828033.1 ENST00000828033.1_278_318_+ 278–318 664.00 2.00 1.22 100.0 GAS5-377 lncRNA spinal cord (Tissue)
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 1072.00 3.24 1.97 100.0 GAS5-377 lncRNA spinal cord (Tissue)
ENST00000828033.1 ENST00000828033.1_252_318_+ 252–318 26691.00 80.56 48.94 100.0 GAS5-377 lncRNA spinal cord (Tissue)
ENST00000830954.1 ENST00000830954.1_968_989_+ 968–989 18.00 75.00 0.03 100.0 MIR205HG-245 lncRNA spinal cord (Tissue)
ENST00000833535.1 ENST00000833535.1_763_828_+ 763–828 5550.00 46.08 10.18 100.0 TAF12-DT-204 lncRNA spinal cord (Tissue)
ENST00000836993.1 ENST00000836993.1_387_463_+ 387–463 338058.00 93.09 619.88 99.65 ZFAS1-238 lncRNA spinal cord (Tissue)
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 1373.00 0.38 2.52 100.0 ZFAS1-238 lncRNA spinal cord (Tissue)