ENCFF001RLX

Library Details

Organism: Homo Sapiens
Biosample: spinal cord (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGB
Description: Part of ENCODE experiment ENCSR000AGB. The libraries contained in this experiment come from human fetal spinal cord tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 593.00 30.09 1.09 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 229.00 7.74 0.42 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 4400182.00 98.75 8068.45 99.77 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 2289.00 2.93 4.20 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 43034.00 55.04 78.91 83.84 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 3741.00 55.50 6.86 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 8102.00 78.81 14.86 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 5788.00 38.82 10.61 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 297228.00 96.75 545.02 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 29321.00 95.71 53.76 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 1810.00 16.93 3.32 95.92 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 87.00 0.81 0.16 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 1227.00 0.03 2.25 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 3924.00 57.13 7.20 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 959.00 7.83 1.76 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_69_+ 1–69 676.00 11.58 1.24 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_42_+ 1–42 249.00 4.27 0.46 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_18_+ 1–18 477.00 8.17 0.87 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHRX-3876801 tRNA-transcript-chrX-3876801_1_55_+ 1–55 3.00 1.07 0.01 100.0 TRNA-TRANSCRIPT-CHRX-3876801 Ile tRNA spinal cord (Tissue)