ENCFF001RLX

Library Details

Organism: Homo Sapiens
Biosample: spinal cord (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGB
Description: Part of ENCODE experiment ENCSR000AGB. The libraries contained in this experiment come from human fetal spinal cord tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 351.00 1.64 0.64 100.0 ENST00000772672 lncRNA spinal cord (Tissue)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 9351.00 67.23 17.15 100.0 ENST00000773843 lncRNA spinal cord (Tissue)
ENST00000775062.1 ENST00000775062.1_1327_1402_+ 1327–1402 6.00 0.00 0.01 100.0 SNHG12-223 lncRNA spinal cord (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 112530.00 53.40 206.34 92.2 SNHG12-223 lncRNA spinal cord (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 95295.00 45.22 174.74 98.64 SNHG12-223 lncRNA spinal cord (Tissue)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 6473.00 0.27 11.87 100.0 SNHG25-206 lncRNA spinal cord (Tissue)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 1536012.00 64.46 2816.53 66.39 SNHG25-206 lncRNA spinal cord (Tissue)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 2471.00 0.10 4.53 100.0 SNHG25-206 lncRNA spinal cord (Tissue)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 557.87 0.02 1.02 55.13 SNHG25-206 lncRNA spinal cord (Tissue)
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 1320.32 0.06 2.42 43.7 SNHG25-206 lncRNA spinal cord (Tissue)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 744.82 0.03 1.37 19.67 SNHG25-206 lncRNA spinal cord (Tissue)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 3150.00 0.13 5.78 62.64 SNHG25-206 lncRNA spinal cord (Tissue)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 520.00 0.02 0.95 100.0 SNHG25-206 lncRNA spinal cord (Tissue)
ENST00000778783.1 ENST00000778783.1_84_171_+ 84–171 358.00 46.37 0.66 100.0 ENST00000778783 lncRNA spinal cord (Tissue)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 7032.00 84.66 12.89 88.93 MIR155HG-205 lncRNA spinal cord (Tissue)
ENST00000784740.1 ENST00000784740.1_245_265_+ 245–265 65.00 67.01 0.12 100.0 ENST00000784740 lncRNA spinal cord (Tissue)
ENST00000785178.1 ENST00000785178.1_899_938_+ 899–938 14.00 0.12 0.03 100.0 ENST00000785178 lncRNA spinal cord (Tissue)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 150.00 2.82 0.28 73.89 ENST00000786284 lncRNA spinal cord (Tissue)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 1075.00 20.22 1.97 100.0 ENST00000786284 lncRNA spinal cord (Tissue)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 53.00 1.00 0.10 45.3 ENST00000786284 lncRNA spinal cord (Tissue)
ENST00000788343.1 ENST00000788343.1_17_107_+ 17–107 196.00 14.49 0.36 77.17 ENST00000788343 lncRNA spinal cord (Tissue)
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 38527.47 48.82 70.65 72.02 ENST00000797550 lncRNA spinal cord (Tissue)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 21381.40 27.10 39.21 39.97 ENST00000797550 lncRNA spinal cord (Tissue)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 2014.00 2.55 3.69 22.44 ENST00000797550 lncRNA spinal cord (Tissue)
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 865918.00 79.45 1587.80 91.78 MIR181A1HG-212 lncRNA spinal cord (Tissue)