ENCFF001RLX

Library Details

Organism: Homo Sapiens
Biosample: spinal cord (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGB
Description: Part of ENCODE experiment ENCSR000AGB. The libraries contained in this experiment come from human fetal spinal cord tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 5355.00 1.47 9.82 100.0 ZFAS1-238 lncRNA spinal cord (Tissue)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 2303.00 0.63 4.22 100.0 ZFAS1-238 lncRNA spinal cord (Tissue)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 6761.00 7.46 12.40 100.0 ZFAS1-242 lncRNA spinal cord (Tissue)
ENST00000836997.1 ENST00000836997.1_305_380_+ 305–380 79121.00 87.35 145.08 100.0 ZFAS1-242 lncRNA spinal cord (Tissue)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 865.00 50.09 1.59 100.0 ENST00000837997 lncRNA spinal cord (Tissue)
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 260.00 15.06 0.48 100.0 ENST00000837997 lncRNA spinal cord (Tissue)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 12884.00 72.93 23.62 81.11 ENST00000839036 lncRNA spinal cord (Tissue)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 44.00 10.28 0.08 100.0 ENST00000849527 lncRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 103434.00 47.69 189.66 54.34 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 20.00 0.01 0.04 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 2213.00 0.05 4.06 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 5114.00 45.63 9.38 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 2611.00 23.30 4.79 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 84.00 3.76 0.15 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 46.00 1.57 0.08 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 14877.00 57.71 27.28 81.14 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 363.00 0.01 0.67 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 4988.00 54.58 9.15 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 4604.00 22.25 8.44 97.83 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 8.00 0.04 0.01 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 122.00 0.59 0.22 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 2178.00 25.90 3.99 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 1951.00 0.12 3.58 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 2049.00 0.13 3.76 83.46 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA spinal cord (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 473.00 0.03 0.87 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA spinal cord (Tissue)