ENCFF001RLX

Library Details

Organism: Homo Sapiens
Biosample: spinal cord (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGB
Description: Part of ENCODE experiment ENCSR000AGB. The libraries contained in this experiment come from human fetal spinal cord tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000663945.1 ENST00000663945.1_2_92_+ 2–92 26202.00 55.22 48.05 90.17 SNHG14-288 lncRNA spinal cord (Tissue)
ENST00000665397.1 ENST00000665397.1_2_81_+ 2–81 2137.00 4.39 3.92 100.0 SNHG14-295 lncRNA spinal cord (Tissue)
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 5478.00 72.54 10.04 100.0 MEG8-240 lncRNA spinal cord (Tissue)
ENST00000666022.1 ENST00000666022.1_1_88_+ 1–88 63.00 0.27 0.12 100.0 SNHG14-303 lncRNA spinal cord (Tissue)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 1478.00 1.02 2.71 100.0 SNHG14-306 lncRNA spinal cord (Tissue)
ENST00000666663.1 ENST00000666663.1_59_82_+ 59–82 4100.00 2.82 7.52 100.0 SNHG14-306 lncRNA spinal cord (Tissue)
ENST00000666663.1 ENST00000666663.1_2_82_+ 2–82 84930.00 58.35 155.73 95.97 SNHG14-306 lncRNA spinal cord (Tissue)
ENST00000666663.1 ENST00000666663.1_42_82_+ 42–82 5852.00 4.02 10.73 100.0 SNHG14-306 lncRNA spinal cord (Tissue)
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 18.00 0.09 0.03 100.0 ENST00000666735 lncRNA spinal cord (Tissue)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 11395.00 57.52 20.89 100.0 ENST00000666735 lncRNA spinal cord (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 22160.00 81.43 40.63 100.0 MEG8-242 lncRNA spinal cord (Tissue)
ENST00000667788.1 ENST00000667788.1_3_90_+ 3–90 13162.50 27.29 24.14 40.78 SNHG14-312 lncRNA spinal cord (Tissue)
ENST00000667788.1 ENST00000667788.1_2_92_+ 2–92 19533.33 40.50 35.82 60.52 SNHG14-312 lncRNA spinal cord (Tissue)
ENST00000667788.1 ENST00000667788.1_16_92_+ 16–92 1684.00 3.49 3.09 100.0 SNHG14-312 lncRNA spinal cord (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 1319.00 0.79 2.42 100.0 MEG8-244 lncRNA spinal cord (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 1710.00 1.03 3.14 100.0 MEG8-244 lncRNA spinal cord (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 158600.00 95.44 290.82 99.97 MEG8-244 lncRNA spinal cord (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 746.00 0.04 1.37 100.0 SNHG1-248 lncRNA spinal cord (Tissue)
ENST00000668048.2 ENST00000668048.2_2490_2559_+ 2490–2559 2.00 0.00 0.00 100.0 SNHG1-248 lncRNA spinal cord (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 9429.00 0.52 17.29 99.35 SNHG1-248 lncRNA spinal cord (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 483.30 0.03 0.89 44.02 SNHG1-248 lncRNA spinal cord (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 4490.00 0.25 8.23 78.79 SNHG1-248 lncRNA spinal cord (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 1089009.00 59.52 1996.88 98.72 SNHG1-248 lncRNA spinal cord (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 1867.00 0.10 3.42 73.45 SNHG1-248 lncRNA spinal cord (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 150248.00 8.21 275.50 99.51 SNHG1-248 lncRNA spinal cord (Tissue)