ENCFF001RLX

Library Details

Organism: Homo Sapiens
Biosample: spinal cord (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGB
Description: Part of ENCODE experiment ENCSR000AGB. The libraries contained in this experiment come from human fetal spinal cord tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 119998.00 79.68 220.04 100.0 LINC01962-202 lncRNA spinal cord (Tissue)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 1069.00 0.71 1.96 100.0 LINC01962-202 lncRNA spinal cord (Tissue)
ENST00000655965.1 ENST00000655965.1_2745_2837_+ 2745–2837 43425.00 24.24 79.63 96.39 SNHG14-241 lncRNA spinal cord (Tissue)
ENST00000656987.1 ENST00000656987.1_14_79_+ 14–79 139020.00 96.55 254.92 100.0 MEG8-228 lncRNA spinal cord (Tissue)
ENST00000657237.1 ENST00000657237.1_1408_1496_+ 1408–1496 7123.00 18.06 13.06 100.0 SNHG14-254 lncRNA spinal cord (Tissue)
ENST00000658769.1 ENST00000658769.1_2_96_+ 2–96 8542.00 16.30 15.66 100.0 SNHG14-261 lncRNA spinal cord (Tissue)
ENST00000658769.1 ENST00000658769.1_810_903_+ 810–903 17125.00 32.68 31.40 87.96 SNHG14-261 lncRNA spinal cord (Tissue)
ENST00000658801.2 ENST00000658801.2_139_171_+ 139–171 36.00 0.13 0.07 100.0 LIMD1-AS1-204 lncRNA spinal cord (Tissue)
ENST00000658801.2 ENST00000658801.2_139_214_+ 139–214 2.00 0.01 0.00 100.0 LIMD1-AS1-204 lncRNA spinal cord (Tissue)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 4554.00 16.22 8.35 85.67 LIMD1-AS1-204 lncRNA spinal cord (Tissue)
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 99987.00 75.19 183.34 88.83 MIR99AHG-262 lncRNA spinal cord (Tissue)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 12797.00 9.62 23.47 100.0 MIR99AHG-262 lncRNA spinal cord (Tissue)
ENST00000660376.1 ENST00000660376.1_1_78_+ 1–78 3564.00 6.11 6.54 100.0 SNHG14-266 lncRNA spinal cord (Tissue)
ENST00000660956.1 ENST00000660956.1_2_92_+ 2–92 877.00 44.93 1.61 100.0 SNHG14-270 lncRNA spinal cord (Tissue)
ENST00000661541.1 ENST00000661541.1_446_534_+ 446–534 1503.00 0.94 2.76 100.0 SNHG14-275 lncRNA spinal cord (Tissue)
ENST00000661688.1 ENST00000661688.1_965_986_+ 965–986 4759.00 0.85 8.73 100.0 MIR9-2HG-225 lncRNA spinal cord (Tissue)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 469666.00 83.73 861.21 88.19 MIR9-2HG-225 lncRNA spinal cord (Tissue)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 1241.00 10.88 2.28 100.0 MEG8-233 lncRNA spinal cord (Tissue)
ENST00000661815.1 ENST00000661815.1_2_70_+ 2–70 4447.00 39.00 8.15 100.0 MEG8-233 lncRNA spinal cord (Tissue)
ENST00000661889.1 ENST00000661889.1_1145_1233_+ 1145–1233 4915.00 20.57 9.01 100.0 SNHG14-278 lncRNA spinal cord (Tissue)
ENST00000661889.1 ENST00000661889.1_2_92_+ 2–92 357.00 1.49 0.65 86.86 SNHG14-278 lncRNA spinal cord (Tissue)
ENST00000662228.1 ENST00000662228.1_1206_1269_+ 1206–1269 4243.00 41.48 7.78 100.0 MEG8-234 lncRNA spinal cord (Tissue)
ENST00000662228.1 ENST00000662228.1_1205_1272_+ 1205–1272 249.00 2.43 0.46 100.0 MEG8-234 lncRNA spinal cord (Tissue)
ENST00000663187.1 ENST00000663187.1_2_76_+ 2–76 1568.00 69.04 2.88 100.0 SNHG17-252 lncRNA spinal cord (Tissue)
ENST00000663945.1 ENST00000663945.1_3_89_+ 3–89 13507.00 28.47 24.77 63.75 SNHG14-288 lncRNA spinal cord (Tissue)