ENCFF001RLW

Library Details

Organism: Homo Sapiens
Biosample: occipital lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFX
Description: Part of ENCODE experiment ENCSR000AFX. The libraries contained in this experiment come from human fetal occipital lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364915.1 ENST00000364915.1_1_76_+ 1–76 2358.00 28.38 7.64 50.5 SNORD117-201 snoRNA occipital lobe (Tissue)
ENST00000364915.1 ENST00000364915.1_2_74_+ 2–74 3349.00 40.31 10.85 58.68 SNORD117-201 snoRNA occipital lobe (Tissue)
ENST00000364969.1 ENST00000364969.1_4_62_+ 4–62 220.00 3.78 0.71 100.0 SNORD114-3-201 snoRNA occipital lobe (Tissue)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 96.00 1.65 0.31 100.0 SNORD114-3-201 snoRNA occipital lobe (Tissue)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 4890.00 84.06 15.85 91.18 SNORD114-3-201 snoRNA occipital lobe (Tissue)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 8.00 1.90 0.03 100.0 RNA5SP298-201 rRNA pseudogene occipital lobe (Tissue)
ENST00000365037.1 ENST00000365037.1_2_82_+ 2–82 22104.00 63.84 71.63 100.0 SNORD115-38-201 snoRNA occipital lobe (Tissue)
ENST00000365073.1 ENST00000365073.1_2_81_+ 2–81 19229.00 53.49 62.32 100.0 SNORD115-10-201 snoRNA occipital lobe (Tissue)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 2540.00 88.04 8.23 100.0 SNORD113-9-201 snoRNA occipital lobe (Tissue)
ENST00000365099.1 ENST00000365099.1_2_82_+ 2–82 3112.00 59.38 10.09 100.0 SNORD115-20-201 snoRNA occipital lobe (Tissue)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 399.00 2.01 1.29 100.0 SNORD38A-201 snoRNA occipital lobe (Tissue)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 235.00 1.19 0.76 100.0 SNORD38A-201 snoRNA occipital lobe (Tissue)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 18544.00 93.55 60.10 100.0 SNORD38A-201 snoRNA occipital lobe (Tissue)
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 6552.00 89.03 21.23 95.68 SNORD114-20-201 snoRNA occipital lobe (Tissue)
ENST00000365328.1 ENST00000365328.1_1_76_+ 1–76 180.00 1.56 0.58 100.0 7SK.1-201 misc RNA occipital lobe (Tissue)
ENST00000365328.1 ENST00000365328.1_270_331_+ 270–331 1850.00 16.06 6.00 77.41 7SK.1-201 misc RNA occipital lobe (Tissue)
ENST00000365328.1 ENST00000365328.1_246_331_+ 246–331 430.00 3.73 1.39 100.0 7SK.1-201 misc RNA occipital lobe (Tissue)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 765.00 6.64 2.48 66.64 7SK.1-201 misc RNA occipital lobe (Tissue)
ENST00000365328.1 ENST00000365328.1_260_331_+ 260–331 217.00 1.88 0.70 100.0 7SK.1-201 misc RNA occipital lobe (Tissue)
ENST00000365328.1 ENST00000365328.1_1_63_+ 1–63 211.00 1.83 0.68 74.56 7SK.1-201 misc RNA occipital lobe (Tissue)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 40.00 0.35 0.13 100.0 7SK.1-201 misc RNA occipital lobe (Tissue)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 1698.00 14.74 5.50 81.6 7SK.1-201 misc RNA occipital lobe (Tissue)
ENST00000365328.1 ENST00000365328.1_238_331_+ 238–331 1477.00 12.82 4.79 100.0 7SK.1-201 misc RNA occipital lobe (Tissue)
ENST00000365382.1 ENST00000365382.1_1_88_+ 1–88 1700.00 72.84 5.51 100.0 SNORD14C-201 snoRNA occipital lobe (Tissue)
ENST00000365391.1 ENST00000365391.1_2_82_+ 2–82 22473.00 66.48 72.83 100.0 SNORD115-44-201 snoRNA occipital lobe (Tissue)