ENCFF001RLW

Library Details

Organism: Homo Sapiens
Biosample: occipital lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFX
Description: Part of ENCODE experiment ENCSR000AFX. The libraries contained in this experiment come from human fetal occipital lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 2686.32 7.41 8.71 24.14 RNY1-201 misc RNA occipital lobe (Tissue)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 12755.10 35.17 41.34 74.81 RNY1-201 misc RNA occipital lobe (Tissue)
ENST00000364228.1 ENST00000364228.1_24_109_+ 24–109 4126.00 11.38 13.37 100.0 RNY1-201 misc RNA occipital lobe (Tissue)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 248.00 0.68 0.80 100.0 RNY1-201 misc RNA occipital lobe (Tissue)
ENST00000364228.1 ENST00000364228.1_1_39_+ 1–39 337.00 0.93 1.09 100.0 RNY1-201 misc RNA occipital lobe (Tissue)
ENST00000364273.1 ENST00000364273.1_2_82_+ 2–82 9374.00 37.50 30.38 100.0 SNORD115-42-201 snoRNA occipital lobe (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 5.00 0.15 0.02 100.0 RNA5SP202-201 rRNA pseudogene occipital lobe (Tissue)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 106.00 3.20 0.34 100.0 RNA5SP202-201 rRNA pseudogene occipital lobe (Tissue)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 2.00 0.06 0.01 100.0 RNA5SP202-201 rRNA pseudogene occipital lobe (Tissue)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 13.00 0.39 0.04 100.0 RNA5SP202-201 rRNA pseudogene occipital lobe (Tissue)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 19.20 0.58 0.06 3.59 RNA5SP202-201 rRNA pseudogene occipital lobe (Tissue)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 16.00 0.48 0.05 100.0 RNA5SP202-201 rRNA pseudogene occipital lobe (Tissue)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 104.00 3.14 0.34 100.0 RNA5SP202-201 rRNA pseudogene occipital lobe (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 332.59 10.04 1.08 42.69 RNA5SP202-201 rRNA pseudogene occipital lobe (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 443.40 13.39 1.44 82.88 RNA5SP202-201 rRNA pseudogene occipital lobe (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 921.00 26.40 2.98 100.0 SNORD114-9-201 snoRNA occipital lobe (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 2219.00 63.60 7.19 100.0 SNORD114-9-201 snoRNA occipital lobe (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 541.00 3.13 1.75 100.0 Y_RNA.234-201 misc RNA occipital lobe (Tissue)
ENST00000364461.1 ENST00000364461.1_2_82_+ 2–82 7900.00 67.74 25.60 100.0 SNORD115-23-201 snoRNA occipital lobe (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 13.00 1.33 0.04 100.0 RNA5SP141-201 rRNA pseudogene occipital lobe (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 152.00 69.72 0.49 100.0 SNORD114-15-201 snoRNA occipital lobe (Tissue)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 993.00 40.90 3.22 100.0 ENST00000364722 snoRNA occipital lobe (Tissue)
ENST00000364809.1 ENST00000364809.1_2_81_+ 2–81 10548.00 39.64 34.18 100.0 SNORD115-15-201 snoRNA occipital lobe (Tissue)
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 90.00 27.69 0.29 100.0 SNORD113-3-201 snoRNA occipital lobe (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 9245.00 80.43 29.96 100.0 SNORD52-201 snoRNA occipital lobe (Tissue)