ENCFF001RLW
Library Details
| Organism: | Homo Sapiens |
|---|---|
| Biosample: | occipital lobe (Tissue) |
| GEO DB ID: | Not available |
| ENCODE Experiment ID: | ENCSR000AFX |
| Description: | Part of ENCODE experiment ENCSR000AFX. The libraries contained in this experiment come from human fetal occipital lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size |
|---|---|
| Author: | Thomas Gingeras, CSHL |
sncRNAs in this Library
| Precursor Transcript ID | sncRNA Name | sncRNA position in precursor | Expression | Expression Fraction | Expression (CPM) | Prominence | Transcript Name | Transcript Type | Biosample |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000362912.1 | ENST00000362912.1_2_82_+ | 2–82 | 35985.00 | 67.49 | 116.62 | 96.18 | SNORD115-9-201 | snoRNA | occipital lobe (Tissue) |
| ENST00000362973.1 | ENST00000362973.1_96_117_+ | 96–117 | 669.00 | 37.44 | 2.17 | 81.09 | RNA5SP358-201 | rRNA pseudogene | occipital lobe (Tissue) |
| ENST00000363124.1 | ENST00000363124.1_17_32_+ | 17–32 | 14.00 | 0.93 | 0.05 | 63.64 | RNA5SP145-201 | rRNA pseudogene | occipital lobe (Tissue) |
| ENST00000363182.1 | ENST00000363182.1_1_32_+ | 1–32 | 2858.00 | 36.31 | 9.26 | 100.0 | Y_RNA.105-201 | misc RNA | occipital lobe (Tissue) |
| ENST00000363194.1 | ENST00000363194.1_1_32_+ | 1–32 | 1496.00 | 22.10 | 4.85 | 100.0 | RNY4P9-201 | misc RNA | occipital lobe (Tissue) |
| ENST00000363286.1 | ENST00000363286.1_55_116_+ | 55–116 | 334.00 | 1.85 | 1.08 | 100.0 | RNU5B-1-201 | snRNA | occipital lobe (Tissue) |
| ENST00000363286.1 | ENST00000363286.1_63_116_+ | 63–116 | 498.00 | 2.76 | 1.61 | 100.0 | RNU5B-1-201 | snRNA | occipital lobe (Tissue) |
| ENST00000363286.1 | ENST00000363286.1_68_116_+ | 68–116 | 339.00 | 1.88 | 1.10 | 100.0 | RNU5B-1-201 | snRNA | occipital lobe (Tissue) |
| ENST00000363286.1 | ENST00000363286.1_1_78_+ | 1–78 | 2125.00 | 11.77 | 6.89 | 77.08 | RNU5B-1-201 | snRNA | occipital lobe (Tissue) |
| ENST00000363286.1 | ENST00000363286.1_1_69_+ | 1–69 | 151.00 | 0.84 | 0.49 | 100.0 | RNU5B-1-201 | snRNA | occipital lobe (Tissue) |
| ENST00000363286.1 | ENST00000363286.1_1_86_+ | 1–86 | 4510.00 | 24.98 | 14.62 | 100.0 | RNU5B-1-201 | snRNA | occipital lobe (Tissue) |
| ENST00000363293.1 | ENST00000363293.1_2_82_+ | 2–82 | 115420.00 | 93.50 | 374.05 | 97.88 | SNORD115-18-201 | snoRNA | occipital lobe (Tissue) |
| ENST00000363341.1 | ENST00000363341.1_1_36_+ | 1–36 | 570.00 | 1.15 | 1.85 | 43.81 | RNY4P27-201 | misc RNA | occipital lobe (Tissue) |
| ENST00000363341.1 | ENST00000363341.1_1_32_+ | 1–32 | 41758.00 | 84.47 | 135.33 | 98.28 | RNY4P27-201 | misc RNA | occipital lobe (Tissue) |
| ENST00000363444.1 | ENST00000363444.1_74_99_+ | 74–99 | 1503.00 | 22.79 | 4.87 | 100.0 | Y_RNA.136-201 | misc RNA | occipital lobe (Tissue) |
| ENST00000363608.1 | ENST00000363608.1_2_82_+ | 2–82 | 29501.00 | 64.83 | 95.61 | 100.0 | SNORD115-41-201 | snoRNA | occipital lobe (Tissue) |
| ENST00000363633.1 | ENST00000363633.1_2_82_+ | 2–82 | 15221.00 | 46.24 | 49.33 | 100.0 | SNORD115-5-201 | snoRNA | occipital lobe (Tissue) |
| ENST00000363723.1 | ENST00000363723.1_2_82_+ | 2–82 | 8248.00 | 59.34 | 26.73 | 100.0 | SNORD115-33-201 | snoRNA | occipital lobe (Tissue) |
| ENST00000363742.1 | ENST00000363742.1_4_67_+ | 4–67 | 2165.00 | 92.13 | 7.02 | 98.99 | SNORD114-25-201 | snoRNA | occipital lobe (Tissue) |
| ENST00000363762.1 | ENST00000363762.1_3_72_+ | 3–72 | 9902.00 | 97.82 | 32.09 | 100.0 | SNORD113-7-201 | snoRNA | occipital lobe (Tissue) |
| ENST00000363856.1 | ENST00000363856.1_2_82_+ | 2–82 | 3937.00 | 27.24 | 12.76 | 100.0 | SNORD115-8-201 | snoRNA | occipital lobe (Tissue) |
| ENST00000363872.1 | ENST00000363872.1_74_98_+ | 74–98 | 714.00 | 51.29 | 2.31 | 100.0 | Y_RNA.181-201 | misc RNA | occipital lobe (Tissue) |
| ENST00000363887.1 | ENST00000363887.1_2_82_+ | 2–82 | 18987.00 | 53.79 | 61.53 | 100.0 | SNORD115-16-201 | snoRNA | occipital lobe (Tissue) |
| ENST00000364079.1 | ENST00000364079.1_2_82_+ | 2–82 | 5952.00 | 54.61 | 19.29 | 100.0 | SNORD115-32-201 | snoRNA | occipital lobe (Tissue) |
| ENST00000364117.1 | ENST00000364117.1_2_82_+ | 2–82 | 8357.00 | 55.79 | 27.08 | 100.0 | SNORD115-30-201 | snoRNA | occipital lobe (Tissue) |