ENCFF001RLW

Library Details

Organism: Homo Sapiens
Biosample: occipital lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFX
Description: Part of ENCODE experiment ENCSR000AFX. The libraries contained in this experiment come from human fetal occipital lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362441.1 ENST00000362441.1_2_82_+ 2–82 12222.00 43.45 39.61 100.0 SNORD115-34-201 snoRNA occipital lobe (Tissue)
ENST00000362477.1 ENST00000362477.1_70_120_+ 70–120 140.00 14.29 0.45 100.0 RNU5E-1-201 snRNA occipital lobe (Tissue)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 2.00 5.26 0.01 100.0 SNORA31-201 snoRNA occipital lobe (Tissue)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 29.00 1.92 0.09 90.62 RNA5SP389-201 rRNA pseudogene occipital lobe (Tissue)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 3.00 0.20 0.01 100.0 RNA5SP389-201 rRNA pseudogene occipital lobe (Tissue)
ENST00000362610.1 ENST00000362610.1_1_76_+ 1–76 8.00 0.53 0.03 100.0 RNA5SP389-201 rRNA pseudogene occipital lobe (Tissue)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 30.00 1.99 0.10 85.71 RNA5SP389-201 rRNA pseudogene occipital lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 143.00 1.35 0.46 100.0 RNU5A-1-201 snRNA occipital lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_60_116_+ 60–116 1051.00 9.95 3.41 79.38 RNU5A-1-201 snRNA occipital lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 303.00 2.87 0.98 79.95 RNU5A-1-201 snRNA occipital lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_29_116_+ 29–116 431.00 4.08 1.40 81.47 RNU5A-1-201 snRNA occipital lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 231.00 2.19 0.75 59.08 RNU5A-1-201 snRNA occipital lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_40_116_+ 40–116 32.00 0.30 0.10 100.0 RNU5A-1-201 snRNA occipital lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_36_116_+ 36–116 77.00 0.73 0.25 41.62 RNU5A-1-201 snRNA occipital lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 385.00 3.65 1.25 37.34 RNU5A-1-201 snRNA occipital lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_22_116_+ 22–116 100.03 0.95 0.32 50.01 RNU5A-1-201 snRNA occipital lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 201.00 1.90 0.65 54.32 RNU5A-1-201 snRNA occipital lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_1_78_+ 1–78 488.00 4.62 1.58 100.0 RNU5A-1-201 snRNA occipital lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 1231.34 11.66 3.99 39.73 RNU5A-1-201 snRNA occipital lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 1971.61 18.67 6.39 66.61 RNU5A-1-201 snRNA occipital lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_24_116_+ 24–116 106.46 1.01 0.35 41.42 RNU5A-1-201 snRNA occipital lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_34_116_+ 34–116 158.00 1.50 0.51 84.95 RNU5A-1-201 snRNA occipital lobe (Tissue)
ENST00000362723.1 ENST00000362723.1_3_71_+ 3–71 827.00 82.37 2.68 100.0 SNORD114-14-201 snoRNA occipital lobe (Tissue)
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 347.00 16.92 1.12 100.0 SNORD104-201 snoRNA occipital lobe (Tissue)
ENST00000362883.1 ENST00000362883.1_10_70_+ 10–70 122.00 5.95 0.40 100.0 SNORD104-201 snoRNA occipital lobe (Tissue)