ENCFF001RLW

Library Details

Organism: Homo Sapiens
Biosample: occipital lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFX
Description: Part of ENCODE experiment ENCSR000AFX. The libraries contained in this experiment come from human fetal occipital lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 16.00 3.82 0.05 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 10.00 0.05 0.03 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 61.00 3.67 0.20 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 11.00 0.66 0.04 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 23.00 1.38 0.07 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 8.00 0.48 0.03 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 159.00 9.56 0.52 98.76 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 61.00 3.67 0.20 53.51 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 129.00 8.00 0.42 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 190.00 11.78 0.62 37.04 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 69.00 4.51 0.22 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 39.00 0.85 0.13 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 61.00 1.32 0.20 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 3071.00 66.59 9.95 82.29 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 39.00 0.85 0.13 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 49.00 4.10 0.16 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 199.00 19.74 0.64 62.58 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 8.00 0.81 0.03 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 59.00 5.61 0.19 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 50.00 4.75 0.16 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 411.00 39.07 1.33 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 72.00 0.12 0.23 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 57.00 31.32 0.18 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 116.00 41.43 0.38 75.82 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_13_+ 1–13 2.00 0.71 0.01 100.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA occipital lobe (Tissue)