ENCFF001RLW

Library Details

Organism: Homo Sapiens
Biosample: occipital lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFX
Description: Part of ENCODE experiment ENCSR000AFX. The libraries contained in this experiment come from human fetal occipital lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 50.00 3.34 0.16 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 237.00 15.85 0.77 97.13 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 4.00 0.27 0.01 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 345.00 37.30 1.12 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 730.00 2.63 2.37 91.25 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 15.00 0.05 0.05 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 142.00 0.51 0.46 85.03 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 3739.00 13.47 12.12 52.92 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 475.00 1.71 1.54 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 5.00 0.02 0.02 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 671.00 2.42 2.17 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 12.00 30.00 0.04 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 44.00 0.10 0.14 97.78 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 803.00 78.27 2.60 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 19.00 1.85 0.06 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 86.00 23.96 0.28 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 12.00 1.00 0.04 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 8.00 0.02 0.03 1.46 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 3.00 0.01 0.01 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 66.00 13.66 0.21 81.48 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 35.00 7.25 0.11 34.65 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 314.00 26.84 1.02 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 413.00 1.52 1.34 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 15694.00 57.83 50.86 94.09 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 9.00 5.26 0.03 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA occipital lobe (Tissue)