ENCFF001RLW

Library Details

Organism: Homo Sapiens
Biosample: occipital lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFX
Description: Part of ENCODE experiment ENCSR000AFX. The libraries contained in this experiment come from human fetal occipital lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000497519.1 ENST00000497519.1_681_769_+ 681–769 4843.00 82.72 15.70 100.0 RPL5-205 retained intron occipital lobe (Tissue)
ENST00000499525.1 ENST00000499525.1_506_558_+ 506–558 354.00 33.65 1.15 100.0 ZBED9-AS1-201 lncRNA occipital lobe (Tissue)
ENST00000507485.1 ENST00000507485.1_1149_1210_+ 1149–1210 12159.00 94.15 39.40 100.0 RPS3A-206 retained intron occipital lobe (Tissue)
ENST00000509578.1 ENST00000509578.1_1330_1389_+ 1330–1389 26116.00 98.20 84.64 100.0 COX7C-203 protein coding occipital lobe (Tissue)
ENST00000513027.3 ENST00000513027.3_263_305_+ 263–305 467.00 0.67 1.51 100.0 RACK1-229 protein coding occipital lobe (Tissue)
ENST00000513027.3 ENST00000513027.3_241_308_+ 241–308 16702.88 24.13 54.13 32.97 RACK1-229 protein coding occipital lobe (Tissue)
ENST00000513027.3 ENST00000513027.3_241_306_+ 241–306 45127.86 65.19 146.25 72.0 RACK1-229 protein coding occipital lobe (Tissue)
ENST00000513027.3 ENST00000513027.3_272_305_+ 272–305 2160.00 3.12 7.00 83.82 RACK1-229 protein coding occipital lobe (Tissue)
ENST00000513060.5 ENST00000513060.5_712_783_+ 712–783 53096.00 73.83 172.07 96.0 RACK1-230 retained intron occipital lobe (Tissue)
ENST00000513060.5 ENST00000513060.5_713_786_+ 713–786 18115.00 25.19 58.71 71.56 RACK1-230 retained intron occipital lobe (Tissue)
ENST00000515961.1 ENST00000515961.1_38_58_+ 38–58 7.00 21.21 0.02 100.0 RNA5SP486-201 rRNA pseudogene occipital lobe (Tissue)
ENST00000516201.1 ENST00000516201.1_1_30_+ 1–30 868.00 83.70 2.81 100.0 SCARNA5-201 scaRNA occipital lobe (Tissue)
ENST00000516507.1 ENST00000516507.1_1_26_+ 1–26 242.00 0.18 0.78 100.0 RNY4-201 misc RNA occipital lobe (Tissue)
ENST00000516507.1 ENST00000516507.1_1_90_+ 1–90 7399.00 5.58 23.98 100.0 RNY4-201 misc RNA occipital lobe (Tissue)
ENST00000516507.1 ENST00000516507.1_15_32_+ 15–32 4264.00 3.21 13.82 100.0 RNY4-201 misc RNA occipital lobe (Tissue)
ENST00000516507.1 ENST00000516507.1_1_32_+ 1–32 83253.00 62.77 269.80 98.21 RNY4-201 misc RNA occipital lobe (Tissue)
ENST00000516507.1 ENST00000516507.1_41_93_+ 41–93 284.00 0.21 0.92 100.0 RNY4-201 misc RNA occipital lobe (Tissue)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 6488.00 4.89 21.03 97.58 RNY4-201 misc RNA occipital lobe (Tissue)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 9.00 0.01 0.03 100.0 RNY4-201 misc RNA occipital lobe (Tissue)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 422.00 0.32 1.37 48.79 RNY4-201 misc RNA occipital lobe (Tissue)
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 18110.00 13.65 58.69 92.27 RNY4-201 misc RNA occipital lobe (Tissue)
ENST00000516507.1 ENST00000516507.1_1_36_+ 1–36 1611.00 1.21 5.22 51.44 RNY4-201 misc RNA occipital lobe (Tissue)
ENST00000516507.1 ENST00000516507.1_1_48_+ 1–48 221.00 0.17 0.72 100.0 RNY4-201 misc RNA occipital lobe (Tissue)
ENST00000516507.1 ENST00000516507.1_54_93_+ 54–93 100.00 0.08 0.32 48.31 RNY4-201 misc RNA occipital lobe (Tissue)
ENST00000517927.2 ENST00000517927.2_384_405_+ 384–405 563.00 84.03 1.82 89.79 MIR3142HG-201 lncRNA occipital lobe (Tissue)