ENCFF001RLU

Library Details

Organism: Homo Sapiens
Biosample: spinal cord (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGB
Description: Part of ENCODE experiment ENCSR000AGB. The libraries contained in this experiment come from human fetal spinal cord tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 192.00 12.69 0.65 100.0 SNORD113-3-201 snoRNA spinal cord (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 9194.00 60.02 31.23 100.0 SNORD52-201 snoRNA spinal cord (Tissue)
ENST00000364915.1 ENST00000364915.1_2_74_+ 2–74 2272.00 24.71 7.72 44.87 SNORD117-201 snoRNA spinal cord (Tissue)
ENST00000364915.1 ENST00000364915.1_1_76_+ 1–76 2791.00 30.36 9.48 63.61 SNORD117-201 snoRNA spinal cord (Tissue)
ENST00000364969.1 ENST00000364969.1_4_62_+ 4–62 2233.00 3.94 7.59 100.0 SNORD114-3-201 snoRNA spinal cord (Tissue)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 1630.00 2.88 5.54 100.0 SNORD114-3-201 snoRNA spinal cord (Tissue)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 48230.00 85.09 163.85 96.81 SNORD114-3-201 snoRNA spinal cord (Tissue)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 11.00 0.90 0.04 100.0 RNA5SP298-201 rRNA pseudogene spinal cord (Tissue)
ENST00000365037.1 ENST00000365037.1_2_82_+ 2–82 25810.00 44.75 87.68 100.0 SNORD115-38-201 snoRNA spinal cord (Tissue)
ENST00000365073.1 ENST00000365073.1_2_81_+ 2–81 28174.00 41.61 95.71 100.0 SNORD115-10-201 snoRNA spinal cord (Tissue)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 11189.00 78.85 38.01 100.0 SNORD113-9-201 snoRNA spinal cord (Tissue)
ENST00000365099.1 ENST00000365099.1_2_82_+ 2–82 3868.00 49.72 13.14 100.0 SNORD115-20-201 snoRNA spinal cord (Tissue)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 20319.00 89.03 69.03 100.0 SNORD38A-201 snoRNA spinal cord (Tissue)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 194.00 0.85 0.66 100.0 SNORD38A-201 snoRNA spinal cord (Tissue)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 988.00 4.33 3.36 100.0 SNORD38A-201 snoRNA spinal cord (Tissue)
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 66257.00 93.12 225.09 98.4 SNORD114-20-201 snoRNA spinal cord (Tissue)
ENST00000365328.1 ENST00000365328.1_238_331_+ 238–331 4590.00 15.31 15.59 100.0 7SK.1-201 misc RNA spinal cord (Tissue)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 1928.00 6.43 6.55 71.3 7SK.1-201 misc RNA spinal cord (Tissue)
ENST00000365328.1 ENST00000365328.1_260_331_+ 260–331 664.00 2.21 2.26 100.0 7SK.1-201 misc RNA spinal cord (Tissue)
ENST00000365328.1 ENST00000365328.1_1_76_+ 1–76 708.00 2.36 2.41 100.0 7SK.1-201 misc RNA spinal cord (Tissue)
ENST00000365328.1 ENST00000365328.1_246_331_+ 246–331 1358.00 4.53 4.61 100.0 7SK.1-201 misc RNA spinal cord (Tissue)
ENST00000365328.1 ENST00000365328.1_1_63_+ 1–63 471.00 1.57 1.60 79.97 7SK.1-201 misc RNA spinal cord (Tissue)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 16.00 0.05 0.05 100.0 7SK.1-201 misc RNA spinal cord (Tissue)
ENST00000365328.1 ENST00000365328.1_270_331_+ 270–331 3852.00 12.85 13.09 79.95 7SK.1-201 misc RNA spinal cord (Tissue)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 2639.00 8.80 8.97 77.28 7SK.1-201 misc RNA spinal cord (Tissue)