ENCFF001RLU

Library Details

Organism: Homo Sapiens
Biosample: spinal cord (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGB
Description: Part of ENCODE experiment ENCSR000AGB. The libraries contained in this experiment come from human fetal spinal cord tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364117.1 ENST00000364117.1_2_82_+ 2–82 12281.00 39.67 41.72 100.0 SNORD115-30-201 snoRNA spinal cord (Tissue)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 8638.44 20.18 29.35 74.37 RNY1-201 misc RNA spinal cord (Tissue)
ENST00000364228.1 ENST00000364228.1_24_109_+ 24–109 7665.00 17.90 26.04 100.0 RNY1-201 misc RNA spinal cord (Tissue)
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 2144.00 5.01 7.28 28.02 RNY1-201 misc RNA spinal cord (Tissue)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 333.00 0.78 1.13 100.0 RNY1-201 misc RNA spinal cord (Tissue)
ENST00000364228.1 ENST00000364228.1_1_39_+ 1–39 1078.00 2.52 3.66 100.0 RNY1-201 misc RNA spinal cord (Tissue)
ENST00000364273.1 ENST00000364273.1_2_82_+ 2–82 12367.00 24.79 42.01 100.0 SNORD115-42-201 snoRNA spinal cord (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 3141.46 12.70 10.67 45.13 RNA5SP202-201 rRNA pseudogene spinal cord (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 103.97 0.42 0.35 57.44 RNA5SP202-201 rRNA pseudogene spinal cord (Tissue)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 711.00 2.87 2.42 100.0 RNA5SP202-201 rRNA pseudogene spinal cord (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 7.00 0.03 0.02 100.0 RNA5SP202-201 rRNA pseudogene spinal cord (Tissue)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 62.38 0.25 0.21 35.45 RNA5SP202-201 rRNA pseudogene spinal cord (Tissue)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 165.00 0.67 0.56 100.0 RNA5SP202-201 rRNA pseudogene spinal cord (Tissue)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 5.00 0.02 0.02 100.0 RNA5SP202-201 rRNA pseudogene spinal cord (Tissue)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 855.00 3.46 2.90 100.0 RNA5SP202-201 rRNA pseudogene spinal cord (Tissue)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 42.00 0.17 0.14 100.0 RNA5SP202-201 rRNA pseudogene spinal cord (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 12409.00 48.11 42.16 100.0 SNORD114-9-201 snoRNA spinal cord (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 10334.00 40.06 35.11 100.0 SNORD114-9-201 snoRNA spinal cord (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 696.00 4.41 2.36 100.0 Y_RNA.234-201 misc RNA spinal cord (Tissue)
ENST00000364451.1 ENST00000364451.1_1_95_+ 1–95 1.00 0.00 0.00 100.0 RNA5S9-201 rRNA spinal cord (Tissue)
ENST00000364461.1 ENST00000364461.1_2_82_+ 2–82 6418.00 49.66 21.80 100.0 SNORD115-23-201 snoRNA spinal cord (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 29.00 1.15 0.10 100.0 RNA5SP141-201 rRNA pseudogene spinal cord (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 586.00 46.43 1.99 100.0 SNORD114-15-201 snoRNA spinal cord (Tissue)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 467.00 31.92 1.59 100.0 ENST00000364722 snoRNA spinal cord (Tissue)
ENST00000364809.1 ENST00000364809.1_2_81_+ 2–81 14648.00 27.69 49.76 100.0 SNORD115-15-201 snoRNA spinal cord (Tissue)