ENCFF001RLU

Library Details

Organism: Homo Sapiens
Biosample: spinal cord (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGB
Description: Part of ENCODE experiment ENCSR000AGB. The libraries contained in this experiment come from human fetal spinal cord tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365382.1 ENST00000365382.1_1_88_+ 1–88 870.00 44.05 2.96 100.0 SNORD14C-201 snoRNA spinal cord (Tissue)
ENST00000365391.1 ENST00000365391.1_2_82_+ 2–82 31008.00 48.50 105.34 100.0 SNORD115-44-201 snoRNA spinal cord (Tissue)
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 75.00 4.68 0.25 100.0 RNA5SP77-201 rRNA pseudogene spinal cord (Tissue)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 66598.00 65.49 226.25 99.65 SNORD114-22-201 snoRNA spinal cord (Tissue)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 32022.00 31.49 108.79 100.0 SNORD114-22-201 snoRNA spinal cord (Tissue)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 12925.00 84.12 43.91 100.0 SNORD6-201 snoRNA spinal cord (Tissue)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 791.00 5.15 2.69 100.0 SNORD6-201 snoRNA spinal cord (Tissue)
ENST00000365484.1 ENST00000365484.1_1_95_+ 1–95 2293.00 9.11 7.79 100.0 RNY3-201 misc RNA spinal cord (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 3031.00 4.54 10.30 87.22 SNORD82-201 snoRNA spinal cord (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 6107.63 9.15 20.75 48.41 SNORD82-201 snoRNA spinal cord (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 6399.42 9.59 21.74 50.72 SNORD82-201 snoRNA spinal cord (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 677.00 1.01 2.30 100.0 SNORD82-201 snoRNA spinal cord (Tissue)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 148.00 0.22 0.50 100.0 SNORD82-201 snoRNA spinal cord (Tissue)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 43685.00 65.45 148.41 97.06 SNORD82-201 snoRNA spinal cord (Tissue)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 217.00 0.33 0.74 100.0 SNORD82-201 snoRNA spinal cord (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 44061.00 94.66 149.69 96.39 MIR146B-201 miRNA spinal cord (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 63.00 28.51 0.21 100.0 SNHG20-201 lncRNA spinal cord (Tissue)
ENST00000369825.6 ENST00000369825.6_405_425_+ 405–425 82.00 7.84 0.28 100.0 ATP5MK-205 protein coding spinal cord (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 265.00 25.33 0.90 100.0 ATP5MK-205 protein coding spinal cord (Tissue)
ENST00000377186.4 ENST00000377186.4_697_717_+ 697–717 28.00 8.31 0.10 100.0 LINC01556-201 lncRNA spinal cord (Tissue)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 16.00 66.67 0.05 100.0 ATAD3A-202 protein coding spinal cord (Tissue)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 5674.00 53.16 19.28 71.62 TMC5-202 protein coding spinal cord (Tissue)
ENST00000382874.6 ENST00000382874.6_779_809_+ 779–809 64.00 64.00 0.22 100.0 ZMYM2-203 protein coding spinal cord (Tissue)
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 1871.00 20.65 6.36 100.0 RNVU1-7-201 snRNA spinal cord (Tissue)
ENST00000383884.1 ENST00000383884.1_1_75_+ 1–75 1933.00 48.64 6.57 100.0 SNORD24-201 snoRNA spinal cord (Tissue)