ENCFF001RLU

Library Details

Organism: Homo Sapiens
Biosample: spinal cord (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGB
Description: Part of ENCODE experiment ENCSR000AGB. The libraries contained in this experiment come from human fetal spinal cord tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 1141.00 9.49 3.88 100.0 SNORD104-201 snoRNA spinal cord (Tissue)
ENST00000362912.1 ENST00000362912.1_2_82_+ 2–82 45250.00 52.65 153.72 95.54 SNORD115-9-201 snoRNA spinal cord (Tissue)
ENST00000362973.1 ENST00000362973.1_96_117_+ 96–117 8449.00 42.34 28.70 81.69 RNA5SP358-201 rRNA pseudogene spinal cord (Tissue)
ENST00000363124.1 ENST00000363124.1_17_32_+ 17–32 31.00 0.76 0.11 73.81 RNA5SP145-201 rRNA pseudogene spinal cord (Tissue)
ENST00000363182.1 ENST00000363182.1_1_32_+ 1–32 87.00 20.52 0.30 100.0 Y_RNA.105-201 misc RNA spinal cord (Tissue)
ENST00000363194.1 ENST00000363194.1_1_32_+ 1–32 5346.00 43.40 18.16 100.0 RNY4P9-201 misc RNA spinal cord (Tissue)
ENST00000363286.1 ENST00000363286.1_63_116_+ 63–116 3849.00 14.05 13.08 100.0 RNU5B-1-201 snRNA spinal cord (Tissue)
ENST00000363286.1 ENST00000363286.1_68_116_+ 68–116 1779.00 6.49 6.04 100.0 RNU5B-1-201 snRNA spinal cord (Tissue)
ENST00000363286.1 ENST00000363286.1_55_116_+ 55–116 1712.00 6.25 5.82 100.0 RNU5B-1-201 snRNA spinal cord (Tissue)
ENST00000363286.1 ENST00000363286.1_1_78_+ 1–78 2052.00 7.49 6.97 70.73 RNU5B-1-201 snRNA spinal cord (Tissue)
ENST00000363286.1 ENST00000363286.1_1_69_+ 1–69 130.00 0.47 0.44 100.0 RNU5B-1-201 snRNA spinal cord (Tissue)
ENST00000363286.1 ENST00000363286.1_1_86_+ 1–86 1053.00 3.84 3.58 100.0 RNU5B-1-201 snRNA spinal cord (Tissue)
ENST00000363293.1 ENST00000363293.1_2_82_+ 2–82 113787.00 90.62 386.56 97.23 SNORD115-18-201 snoRNA spinal cord (Tissue)
ENST00000363341.1 ENST00000363341.1_1_32_+ 1–32 16266.00 59.65 55.26 97.86 RNY4P27-201 misc RNA spinal cord (Tissue)
ENST00000363341.1 ENST00000363341.1_1_36_+ 1–36 511.00 1.87 1.74 59.01 RNY4P27-201 misc RNA spinal cord (Tissue)
ENST00000363444.1 ENST00000363444.1_74_99_+ 74–99 2864.00 16.41 9.73 100.0 Y_RNA.136-201 misc RNA spinal cord (Tissue)
ENST00000363608.1 ENST00000363608.1_2_82_+ 2–82 36061.00 48.76 122.51 100.0 SNORD115-41-201 snoRNA spinal cord (Tissue)
ENST00000363633.1 ENST00000363633.1_2_82_+ 2–82 6827.00 15.12 23.19 100.0 SNORD115-5-201 snoRNA spinal cord (Tissue)
ENST00000363723.1 ENST00000363723.1_2_82_+ 2–82 13826.00 41.12 46.97 100.0 SNORD115-33-201 snoRNA spinal cord (Tissue)
ENST00000363742.1 ENST00000363742.1_4_67_+ 4–67 15052.00 92.40 51.13 99.72 SNORD114-25-201 snoRNA spinal cord (Tissue)
ENST00000363762.1 ENST00000363762.1_3_72_+ 3–72 42822.00 94.08 145.48 100.0 SNORD113-7-201 snoRNA spinal cord (Tissue)
ENST00000363856.1 ENST00000363856.1_2_82_+ 2–82 6362.00 17.90 21.61 100.0 SNORD115-8-201 snoRNA spinal cord (Tissue)
ENST00000363872.1 ENST00000363872.1_74_98_+ 74–98 937.00 36.53 3.18 100.0 Y_RNA.181-201 misc RNA spinal cord (Tissue)
ENST00000363887.1 ENST00000363887.1_2_82_+ 2–82 22062.00 36.69 74.95 100.0 SNORD115-16-201 snoRNA spinal cord (Tissue)
ENST00000364079.1 ENST00000364079.1_2_82_+ 2–82 12551.00 50.53 42.64 100.0 SNORD115-32-201 snoRNA spinal cord (Tissue)