ENCFF001RLU

Library Details

Organism: Homo Sapiens
Biosample: spinal cord (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGB
Description: Part of ENCODE experiment ENCSR000AGB. The libraries contained in this experiment come from human fetal spinal cord tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 4403.00 56.54 14.96 100.0 Y_RNA.14-201 misc RNA spinal cord (Tissue)
ENST00000362441.1 ENST00000362441.1_2_82_+ 2–82 16380.00 29.98 55.65 100.0 SNORD115-34-201 snoRNA spinal cord (Tissue)
ENST00000362477.1 ENST00000362477.1_70_120_+ 70–120 1263.00 41.95 4.29 100.0 RNU5E-1-201 snRNA spinal cord (Tissue)
ENST00000362545.1 ENST00000362545.1_1_85_+ 1–85 3.00 0.07 0.01 37.5 RNA5SP370-201 rRNA pseudogene spinal cord (Tissue)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 25.00 11.21 0.08 100.0 SNORA31-201 snoRNA spinal cord (Tissue)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 22.00 0.54 0.07 66.67 RNA5SP389-201 rRNA pseudogene spinal cord (Tissue)
ENST00000362610.1 ENST00000362610.1_1_76_+ 1–76 12.00 0.29 0.04 100.0 RNA5SP389-201 rRNA pseudogene spinal cord (Tissue)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 39.00 0.95 0.13 76.47 RNA5SP389-201 rRNA pseudogene spinal cord (Tissue)
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 1024.00 1.96 3.48 100.0 RNU5A-1-201 snRNA spinal cord (Tissue)
ENST00000362698.1 ENST00000362698.1_60_116_+ 60–116 7264.00 13.92 24.68 73.76 RNU5A-1-201 snRNA spinal cord (Tissue)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 6117.51 11.72 20.78 37.45 RNU5A-1-201 snRNA spinal cord (Tissue)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 1753.00 3.36 5.96 78.29 RNU5A-1-201 snRNA spinal cord (Tissue)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 1650.00 3.16 5.61 57.69 RNU5A-1-201 snRNA spinal cord (Tissue)
ENST00000362698.1 ENST00000362698.1_40_116_+ 40–116 110.00 0.21 0.37 100.0 RNU5A-1-201 snRNA spinal cord (Tissue)
ENST00000362698.1 ENST00000362698.1_36_116_+ 36–116 372.00 0.71 1.26 30.77 RNU5A-1-201 snRNA spinal cord (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 3769.00 7.22 12.80 46.72 RNU5A-1-201 snRNA spinal cord (Tissue)
ENST00000362698.1 ENST00000362698.1_22_116_+ 22–116 733.25 1.41 2.49 48.46 RNU5A-1-201 snRNA spinal cord (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 1346.00 2.58 4.57 54.27 RNU5A-1-201 snRNA spinal cord (Tissue)
ENST00000362698.1 ENST00000362698.1_29_116_+ 29–116 3097.00 5.93 10.52 75.37 RNU5A-1-201 snRNA spinal cord (Tissue)
ENST00000362698.1 ENST00000362698.1_1_78_+ 1–78 615.00 1.18 2.09 100.0 RNU5A-1-201 snRNA spinal cord (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 10771.61 20.64 36.59 70.04 RNU5A-1-201 snRNA spinal cord (Tissue)
ENST00000362698.1 ENST00000362698.1_24_116_+ 24–116 799.58 1.53 2.72 38.35 RNU5A-1-201 snRNA spinal cord (Tissue)
ENST00000362698.1 ENST00000362698.1_34_116_+ 34–116 1138.00 2.18 3.87 89.61 RNU5A-1-201 snRNA spinal cord (Tissue)
ENST00000362723.1 ENST00000362723.1_3_71_+ 3–71 8023.00 83.68 27.26 100.0 SNORD114-14-201 snoRNA spinal cord (Tissue)
ENST00000362883.1 ENST00000362883.1_10_70_+ 10–70 759.00 6.31 2.58 100.0 SNORD104-201 snoRNA spinal cord (Tissue)