ENCFF001RLU

Library Details

Organism: Homo Sapiens
Biosample: spinal cord (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGB
Description: Part of ENCODE experiment ENCSR000AGB. The libraries contained in this experiment come from human fetal spinal cord tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362283.1 ENST00000362283.1_6_29_+ 6–29 4757.00 78.75 16.16 96.22 MIR30D-201 miRNA spinal cord (Tissue)
ENST00000362283.1 ENST00000362283.1_6_25_+ 6–25 747.00 12.37 2.54 79.98 MIR30D-201 miRNA spinal cord (Tissue)
ENST00000362291.1 ENST00000362291.1_15_35_+ 15–35 48907.00 74.15 166.15 100.0 MIR126-201 miRNA spinal cord (Tissue)
ENST00000362291.1 ENST00000362291.1_52_73_+ 52–73 15017.00 22.77 51.02 94.67 MIR126-201 miRNA spinal cord (Tissue)
ENST00000362298.3 ENST00000362298.3_42_63_+ 42–63 446.00 36.05 1.52 100.0 MIR374A-201 miRNA spinal cord (Tissue)
ENST00000362307.1 ENST00000362307.1_8_29_+ 8–29 276.00 70.41 0.94 100.0 MIR31-201 miRNA spinal cord (Tissue)
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 91.00 0.32 0.31 89.22 RNA5S12-201 rRNA spinal cord (Tissue)
ENST00000362400.1 ENST00000362400.1_1_58_+ 1–58 20.00 0.07 0.07 100.0 RNA5S12-201 rRNA spinal cord (Tissue)
ENST00000362400.1 ENST00000362400.1_26_95_+ 26–95 5.00 0.02 0.02 15.15 RNA5S12-201 rRNA spinal cord (Tissue)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 5.00 0.02 0.02 100.0 RNA5S12-201 rRNA spinal cord (Tissue)
ENST00000362400.1 ENST00000362400.1_15_95_+ 15–95 80.80 0.28 0.27 65.16 RNA5S12-201 rRNA spinal cord (Tissue)
ENST00000362400.1 ENST00000362400.1_1_83_+ 1–83 5.00 0.02 0.02 62.5 RNA5S12-201 rRNA spinal cord (Tissue)
ENST00000362400.1 ENST00000362400.1_20_95_+ 20–95 53.00 0.19 0.18 60.92 RNA5S12-201 rRNA spinal cord (Tissue)
ENST00000362400.1 ENST00000362400.1_1_32_+ 1–32 29.00 0.10 0.10 67.44 RNA5S12-201 rRNA spinal cord (Tissue)
ENST00000362400.1 ENST00000362400.1_58_95_+ 58–95 89.92 0.31 0.31 56.55 RNA5S12-201 rRNA spinal cord (Tissue)
ENST00000362400.1 ENST00000362400.1_17_95_+ 17–95 66.31 0.23 0.23 47.7 RNA5S12-201 rRNA spinal cord (Tissue)
ENST00000362400.1 ENST00000362400.1_79_95_+ 79–95 13.00 0.05 0.04 81.25 RNA5S12-201 rRNA spinal cord (Tissue)
ENST00000362400.1 ENST00000362400.1_12_95_+ 12–95 62.00 0.22 0.21 70.45 RNA5S12-201 rRNA spinal cord (Tissue)
ENST00000362400.1 ENST00000362400.1_56_95_+ 56–95 138.42 0.48 0.47 49.26 RNA5S12-201 rRNA spinal cord (Tissue)
ENST00000362400.1 ENST00000362400.1_32_95_+ 32–95 49.00 0.17 0.17 90.74 RNA5S12-201 rRNA spinal cord (Tissue)
ENST00000362400.1 ENST00000362400.1_1_45_+ 1–45 14.00 0.05 0.05 100.0 RNA5S12-201 rRNA spinal cord (Tissue)
ENST00000362400.1 ENST00000362400.1_23_95_+ 23–95 77.00 0.27 0.26 84.62 RNA5S12-201 rRNA spinal cord (Tissue)
ENST00000362400.1 ENST00000362400.1_5_95_+ 5–95 204.00 0.71 0.69 99.51 RNA5S12-201 rRNA spinal cord (Tissue)
ENST00000362400.1 ENST00000362400.1_83_95_+ 83–95 133.00 0.46 0.45 97.79 RNA5S12-201 rRNA spinal cord (Tissue)
ENST00000362400.1 ENST00000362400.1_1_95_+ 1–95 497.00 1.74 1.69 99.8 RNA5S12-201 rRNA spinal cord (Tissue)