ENCFF001RLU

Library Details

Organism: Homo Sapiens
Biosample: spinal cord (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGB
Description: Part of ENCODE experiment ENCSR000AGB. The libraries contained in this experiment come from human fetal spinal cord tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000617785.1 ENST00000617785.1_1_92_+ 1–92 3753.34 2.91 12.75 40.8 U2.3-201 snRNA spinal cord (Tissue)
ENST00000619225.1 ENST00000619225.1_155_188_+ 155–188 4212.00 3.25 14.31 100.0 U2.6-201 snRNA spinal cord (Tissue)
ENST00000619323.3 ENST00000619323.3_499_516_+ 499–516 1154.00 0.84 3.92 50.66 ENST00000619323 lncRNA spinal cord (Tissue)
ENST00000619323.3 ENST00000619323.3_499_520_+ 499–520 133114.00 96.84 452.22 98.76 ENST00000619323 lncRNA spinal cord (Tissue)
ENST00000625402.1 ENST00000625402.1_2_49_+ 2–49 186.00 12.96 0.63 100.0 SCARNA4-202 scaRNA spinal cord (Tissue)
ENST00000625572.1 ENST00000625572.1_23_92_+ 23–92 1749.00 76.58 5.94 100.0 ENST00000625572 miRNA spinal cord (Tissue)
ENST00000628177.1 ENST00000628177.1_1_79_+ 1–79 27862.00 93.58 94.65 100.0 ENST00000628177 snoRNA spinal cord (Tissue)
ENST00000630615.1 ENST00000630615.1_10_70_+ 10–70 2219.00 93.20 7.54 100.0 ENST00000630615 snoRNA spinal cord (Tissue)
ENST00000635183.1 ENST00000635183.1_1617_1632_+ 1617–1632 42.00 26.09 0.14 100.0 DMRT2-209 protein coding spinal cord (Tissue)
ENST00000635183.1 ENST00000635183.1_323_334_+ 323–334 15.00 9.32 0.05 100.0 DMRT2-209 protein coding spinal cord (Tissue)
ENST00000636377.1 ENST00000636377.1_38_65_+ 38–65 406.00 12.57 1.38 100.0 SNORD98-201 snoRNA spinal cord (Tissue)
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 2125.00 65.79 7.22 100.0 SNORD98-201 snoRNA spinal cord (Tissue)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 67667.98 38.20 229.88 41.61 MIR106AHG-201 lncRNA spinal cord (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3393_+ 3371–3393 468.24 0.26 1.59 15.49 MIR106AHG-201 lncRNA spinal cord (Tissue)
ENST00000636668.1 ENST00000636668.1_2902_2924_+ 2902–2924 502.00 0.28 1.71 100.0 MIR106AHG-201 lncRNA spinal cord (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3391_+ 3371–3391 2327.65 1.31 7.91 77.02 MIR106AHG-201 lncRNA spinal cord (Tissue)
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 381.00 5.71 1.29 100.0 MEG8-222 lncRNA spinal cord (Tissue)
ENST00000638012.2 ENST00000638012.2_1_70_+ 1–70 3558.00 53.34 12.09 100.0 MEG8-222 lncRNA spinal cord (Tissue)
ENST00000640631.2 ENST00000640631.2_7388_7482_+ 7388–7482 16960.00 7.42 57.62 95.28 SNHG14-224 lncRNA spinal cord (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4215_+ 4125–4215 64525.00 28.25 219.21 90.08 SNHG14-224 lncRNA spinal cord (Tissue)
ENST00000640631.2 ENST00000640631.2_9465_9551_+ 9465–9551 19448.00 8.51 66.07 100.0 SNHG14-224 lncRNA spinal cord (Tissue)
ENST00000640631.2 ENST00000640631.2_5267_5357_+ 5267–5357 12512.00 5.48 42.51 87.66 SNHG14-224 lncRNA spinal cord (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 590.00 0.26 2.00 100.0 SNHG14-224 lncRNA spinal cord (Tissue)
ENST00000640631.2 ENST00000640631.2_7389_7479_+ 7389–7479 4333.00 1.90 14.72 40.94 SNHG14-224 lncRNA spinal cord (Tissue)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 54383.00 23.81 184.75 84.84 SNHG14-224 lncRNA spinal cord (Tissue)