ENCFF001RLU

Library Details

Organism: Homo Sapiens
Biosample: spinal cord (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGB
Description: Part of ENCODE experiment ENCSR000AGB. The libraries contained in this experiment come from human fetal spinal cord tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000612233.1 ENST00000612233.1_1528_1555_+ 1528–1555 265.00 0.23 0.90 100.0 NOP56-219 retained intron spinal cord (Tissue)
ENST00000612233.1 ENST00000612233.1_1212_1282_+ 1212–1282 66314.00 56.60 225.28 81.8 NOP56-219 retained intron spinal cord (Tissue)
ENST00000612463.1 ENST00000612463.1_1_83_+ 1–83 1943.00 12.51 6.60 36.95 RNA5-8SN2-201 rRNA spinal cord (Tissue)
ENST00000612463.1 ENST00000612463.1_81_123_+ 81–123 26.27 0.17 0.09 48.64 RNA5-8SN2-201 rRNA spinal cord (Tissue)
ENST00000612463.1 ENST00000612463.1_1_50_+ 1–50 8.00 0.05 0.03 100.0 RNA5-8SN2-201 rRNA spinal cord (Tissue)
ENST00000612463.1 ENST00000612463.1_1_25_+ 1–25 371.00 2.39 1.26 100.0 RNA5-8SN2-201 rRNA spinal cord (Tissue)
ENST00000612463.1 ENST00000612463.1_10_37_+ 10–37 235.00 1.51 0.80 100.0 RNA5-8SN2-201 rRNA spinal cord (Tissue)
ENST00000612463.1 ENST00000612463.1_1_81_+ 1–81 4749.00 30.59 16.13 70.97 RNA5-8SN2-201 rRNA spinal cord (Tissue)
ENST00000612463.1 ENST00000612463.1_83_123_+ 83–123 35.22 0.23 0.12 65.21 RNA5-8SN2-201 rRNA spinal cord (Tissue)
ENST00000615835.1 ENST00000615835.1_56_79_+ 56–79 3.00 100.00 0.01 100.0 MIR7974-201 miRNA spinal cord (Tissue)
ENST00000616574.2 ENST00000616574.2_44_64_+ 44–64 97.00 14.74 0.33 100.0 MIR376A1-201 miRNA spinal cord (Tissue)
ENST00000616574.2 ENST00000616574.2_7_27_+ 7–27 239.00 36.32 0.81 100.0 MIR376A1-201 miRNA spinal cord (Tissue)
ENST00000617785.1 ENST00000617785.1_155_187_+ 155–187 1503.00 1.17 5.11 100.0 U2.3-201 snRNA spinal cord (Tissue)
ENST00000617785.1 ENST00000617785.1_93_187_+ 93–187 1060.34 0.82 3.60 36.87 U2.3-201 snRNA spinal cord (Tissue)
ENST00000617785.1 ENST00000617785.1_1_95_+ 1–95 70948.00 55.04 241.03 98.92 U2.3-201 snRNA spinal cord (Tissue)
ENST00000617785.1 ENST00000617785.1_99_187_+ 99–187 2.00 0.00 0.01 100.0 U2.3-201 snRNA spinal cord (Tissue)
ENST00000617785.1 ENST00000617785.1_1_87_+ 1–87 16607.00 12.88 56.42 75.57 U2.3-201 snRNA spinal cord (Tissue)
ENST00000617785.1 ENST00000617785.1_1_64_+ 1–64 2450.00 1.90 8.32 45.95 U2.3-201 snRNA spinal cord (Tissue)
ENST00000617785.1 ENST00000617785.1_1_70_+ 1–70 1403.00 1.09 4.77 80.49 U2.3-201 snRNA spinal cord (Tissue)
ENST00000617785.1 ENST00000617785.1_95_188_+ 95–188 1730.99 1.34 5.88 60.19 U2.3-201 snRNA spinal cord (Tissue)
ENST00000617785.1 ENST00000617785.1_170_188_+ 170–188 51.00 0.04 0.17 100.0 U2.3-201 snRNA spinal cord (Tissue)
ENST00000617785.1 ENST00000617785.1_93_116_+ 93–116 5.00 0.00 0.02 100.0 U2.3-201 snRNA spinal cord (Tissue)
ENST00000617785.1 ENST00000617785.1_1_75_+ 1–75 31.00 0.02 0.11 100.0 U2.3-201 snRNA spinal cord (Tissue)
ENST00000617785.1 ENST00000617785.1_22_116_+ 22–116 171.00 0.13 0.58 100.0 U2.3-201 snRNA spinal cord (Tissue)
ENST00000617785.1 ENST00000617785.1_1_90_+ 1–90 7145.13 5.54 24.27 43.23 U2.3-201 snRNA spinal cord (Tissue)